| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hore_01360 |
|---|
| Symbol | |
|---|
| ID | 7313263 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halothermothrix orenii H 168 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011899 |
|---|
| Strand | + |
|---|
| Start bp | 145240 |
|---|
| End bp | 146508 |
|---|
| Gene Length | 1269 bp |
|---|
| Protein Length | 422 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 643610558 |
|---|
| Product | preprotein translocase, SecY subunit |
|---|
| Protein accession | YP_002507892 |
|---|
| Protein GI | 220930984 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0201] Preprotein translocase subunit SecY |
|---|
| TIGRFAM ID | [TIGR00967] preprotein translocase, SecY subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.000700723 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGATATCTG CTTTAAAGAA TGCCTTTAAA GTGAAGGAAA TCAGGAAGAA GATTTTATTT
GTGCTGGGGA TGATGGTTGT CTACCGGATC GGGGCTCATA TTCCAGTACC CGGTATTGAT
GTTGTTAAAT TACGTGAGAT CCTATTTCAG GGGACAGCTC AGGGGGTATT TGATTACCTG
GACCTCTTTG CCGGGGGAGC TTTGAGGAAT TTTACCATTT TTGCCATGAG TATTACCCCC
TATATTACTG CTTCAATTAT TTTGCAGTTA TTAACCGGAG TTATCCCCAG ACTGGAGGAA
TTACAGAAAC AGGGTGTTGA AGGACGTAAA AAGTTAACCC AGTATACCCG CTACGGAACT
GTAGTCCTGG CTATTATTCA GGCCTTTGGT ATTACCATGT TAATAGGAAG ACATAATGTT
ATTGTAAATC CTAATCTATT CAATCTTATG TTAATTGTAA TCAGTTTGAC TGCGGGTACA
GCTTTTTTAA TGTGGCTTGG GGAACAGATC ACCGACAAAG GTATTGGTAA CGGAATATCA
ATCATTATAT TCACTTCAAT TATTTCCAGA TTCCCATCCT ATATACATCG CAACTGGGAA
TTATATAAAA CTGGAGATAT AACAGCACTA AATATACTAT TCTTCCTGGT TTTAGCCGTT
GTAATTATCG CCGGGGTTAT CTTTATTCAG CAGGGTGAGA GGAGAATTCC TGTTCAGTAT
TCAAAAAGAG TTGTTGGCCG TAAGGTATAC GGGGGTAGAA GTACCCATAT TCCGATGCGG
ATTAACCAGG CAGGGGTTAT TCCGGTAATA TTTGCCCAGG CTGTATTACA GTTCCCGACA
GTTATTGCTG CCGTGCTTCC ATACGGTTGG GCTCAGGATA TAGCAACAGC CCTTGAACCG
GGCAAACCAG TACATTTAGT CCTGTATGCA GCTATGATTT TCTTCTTTAC CTATTTCTGG
ACTGCATTTA CCTTTAATCC TGAAGAAGTA GCCGATAATA TGAGGAAGTC AGGTGCCTTT
ATTCCTGGTA TTAGACCGGG TAAGGCTACT GAAAACTTCC TGACCAGGAT TCTGGTAAGG
GTTACCCTTG CCGGTGCTAT TTTCCTGACT GTAATTGCTA TTATGCCCTA TTTTATCAGT
GATATTACCA GGGTTAGAAT TAGTTTTGGT GGAACTTCCC TCTTAATTAT GACCGGTGTT
GCCTTACAGA CAATGCAGCA GATTGAATCC CAGTTATTGA TGAGGCACTA TGAAGGATTT
ATGAAATAA
|
|---|
| Protein sequence | MISALKNAFK VKEIRKKILF VLGMMVVYRI GAHIPVPGID VVKLREILFQ GTAQGVFDYL
DLFAGGALRN FTIFAMSITP YITASIILQL LTGVIPRLEE LQKQGVEGRK KLTQYTRYGT
VVLAIIQAFG ITMLIGRHNV IVNPNLFNLM LIVISLTAGT AFLMWLGEQI TDKGIGNGIS
IIIFTSIISR FPSYIHRNWE LYKTGDITAL NILFFLVLAV VIIAGVIFIQ QGERRIPVQY
SKRVVGRKVY GGRSTHIPMR INQAGVIPVI FAQAVLQFPT VIAAVLPYGW AQDIATALEP
GKPVHLVLYA AMIFFFTYFW TAFTFNPEEV ADNMRKSGAF IPGIRPGKAT ENFLTRILVR
VTLAGAIFLT VIAIMPYFIS DITRVRISFG GTSLLIMTGV ALQTMQQIES QLLMRHYEGF
MK
|
|---|
| |