| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hore_00590 |
|---|
| Symbol | |
|---|
| ID | 7314277 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halothermothrix orenii H 168 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011899 |
|---|
| Strand | + |
|---|
| Start bp | 68192 |
|---|
| End bp | 69574 |
|---|
| Gene Length | 1383 bp |
|---|
| Protein Length | 460 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 643610477 |
|---|
| Product | Sodium:solute symporter |
|---|
| Protein accession | YP_002507815 |
|---|
| Protein GI | 220930907 |
|---|
| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG0591] Na+/proline symporter |
|---|
| TIGRFAM ID | [TIGR00813] transporter, SSS family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.00000000000000130807 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTTTTAA CAACAGTTAT AGTCTATATG CTATTATTAC TGGCAATCGG GTACTGGGCC
AACAGAAAAA TTAAGGGTTT AACCGATTAT CTACTGGCCG GAAGAAGGCT CGGTTTATGG
CTGACGGCCG GAGCTCTGGC TGCTACCCAT TTTGGTGGAG GTATGGTAGT AGGTGGTGGT
GAGTACGGAT TTATTCATGG GTTTTCTGGA GCCTGGTATG GGATAAGCTG TGGAATTGGA
CTATTATTTT TATCATTTCT AACTGCAGGT AAATTCAGGG ATTTATCCCT TTATACTGTT
CCCGATTATC TAGCACATAG ATATGGTGGA AAAACGGTAA GAGTCCTCGG CGCCATACTA
TCAGTGGTTG CAATAATAGG AATCATTGCT GCCCAGGTAC TGGCAGCTAA AAGTGCCCTG
GCTATACTCG GTATCAAAGG TAATGCCGGG GCTATTATAG CAACCCTTAT ATTTATAATT
TATACTGTCC TGGGAGGACT GTGGGCTGCC ACCATAACTG ATTTTATTCA GGTAATTATT
GCCGGGGTGG GGACGGTTAT TGCGGCCTCA ATGGTATTAT CTAATACTGG AGGGTTATCC
GGGTTAAAGG AATCCCTATC TACTGTGAGT CCAGGTGTTG ATTATTTTAA CCTTTTTGGG
TTTGGATGGA CGACCATTTT ATGGATATTA TTACCTACTG TAATGTATAC CCTTATCGGA
CAGGATTTTT ACCAGAGGTT ATTTGCCAGT AAGGATGGGA TAACGGCCCG AAAGGCTTCT
TTTATCGGAG GTATTTTCTT AATTATTATC AGTTTCTTTC CTGTAATTAC AGGAATGGGA
GCCAGAATGT ATTTTCCGGA AATGACAGAT GCCAGTATGG CTTTACCCCG TCTTGTTCAG
GAATTGTTCC CCCTGGGTCT GGGGGCAGTC TTTCTGGCAG CCCTTCTTGC AGCAATTATG
TCTACGGCTG ATTCCCTACT GACGGCAGGT ACCTCCCACC TTATCAAGGA TTTCTGGTTT
GAGGTGTTTA ACCGCGGTCA GGACAGGGAT AAGGGTCAGA TTTTAACAAT TTCAAGAGTT
ACGACCGGTG TTCTCGGTCT TTTAGCCCTG ATTATTGCCC TACTGGTTCC AACTGTGATT
GATGCCTTGA TTTATTCATA TACAATGTAT ACCGCCGGTG TTTTTATTCC CCTGATCGGA
GGGGTACTGT GGCGCGGGGC AACCCGTAAG GGGGCCATTT CAGCTATTTT TGCCGGCAGT
CTGGTTGCCA TAACCGGTAT TTTAACCGGA TTTGAGGCCT GGGGAATACC AGTTGAAGTA
TATTCAGCGG TAATATCCCT GGTATTCTTT GTTGTAATTT CTCTGGCAGA TAAAAAAGAT
TAA
|
|---|
| Protein sequence | MVLTTVIVYM LLLLAIGYWA NRKIKGLTDY LLAGRRLGLW LTAGALAATH FGGGMVVGGG
EYGFIHGFSG AWYGISCGIG LLFLSFLTAG KFRDLSLYTV PDYLAHRYGG KTVRVLGAIL
SVVAIIGIIA AQVLAAKSAL AILGIKGNAG AIIATLIFII YTVLGGLWAA TITDFIQVII
AGVGTVIAAS MVLSNTGGLS GLKESLSTVS PGVDYFNLFG FGWTTILWIL LPTVMYTLIG
QDFYQRLFAS KDGITARKAS FIGGIFLIII SFFPVITGMG ARMYFPEMTD ASMALPRLVQ
ELFPLGLGAV FLAALLAAIM STADSLLTAG TSHLIKDFWF EVFNRGQDRD KGQILTISRV
TTGVLGLLAL IIALLVPTVI DALIYSYTMY TAGVFIPLIG GVLWRGATRK GAISAIFAGS
LVAITGILTG FEAWGIPVEV YSAVISLVFF VVISLADKKD
|
|---|
| |