| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_6643 |
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| Symbol | |
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| ID | 8549060 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | + |
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| Start bp | 9104002 |
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| End bp | 9104679 |
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| Gene Length | 678 bp |
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| Protein Length | 225 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 646391303 |
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| Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
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| Protein accession | YP_003271002 |
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| Protein GI | 262199793 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.00172132 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCCAGGA GTAACTCTCA TCCCGAAGCG GCCGCCGCAC TGGTCGCCCG GGCCAAACGC
GGCGACGACA GCGCCTTTGG CGAGCTCGTC CGCCGCTACC GAGAGCGCAT TTTCGCGCTG
GCGCTGCACC TCACCGGTCG CGAGAGCGAC GCCGATGACA TCACCCAGGA TGTGTTTCTC
AAAGCGTATC GCGCGCTGGA GAGCTTCGAA GGGCGCAGCG AGTTTTTCAC CTGGGTGTAC
CGCATGACCG TCAACCGCTC GCTCAACGTG CGCCGCGATC GCAAGCGCCG CAGCGAGACC
ACCATGGATG ACCCGCGCGT GGACCGCGCC GTGGCCGTGG ACGCAGCCGG CGACCCGCAG
CGCGCGGCCG AATTGCGCCA GACCTATACC TGCCTGCTGG CCGCGCTCGA CCGCCTGCCC
GCGTCCATGC GCACCTCGGT CGTGCTGGTC ACGCTGCAGG GCCTCTCACA CGCCGAAGCC
GCGGTGGTGC AATCGTGTTC GCCCGGCACC ATCGCCTGGC GCATCCACGA CGCCCGTCGC
CGGCTGCGGC GCGCGCTCGA GCGCCAGAGC CCGGCGCTGC GTTCCGCCGC CCGCGCGCTG
AGCGACGACC AGCGCGCTCC CGATCTCGGT CGGCTGCTGC AGGAGTGGGA AATCCCCACC
GGCCTGCTGC CCTCGTAG
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| Protein sequence | MARSNSHPEA AAALVARAKR GDDSAFGELV RRYRERIFAL ALHLTGRESD ADDITQDVFL
KAYRALESFE GRSEFFTWVY RMTVNRSLNV RRDRKRRSET TMDDPRVDRA VAVDAAGDPQ
RAAELRQTYT CLLAALDRLP ASMRTSVVLV TLQGLSHAEA AVVQSCSPGT IAWRIHDARR
RLRRALERQS PALRSAARAL SDDQRAPDLG RLLQEWEIPT GLLPS
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