Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hoch_6600 |
Symbol | |
ID | 8549017 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haliangium ochraceum DSM 14365 |
Kingdom | Bacteria |
Replicon accession | NC_013440 |
Strand | + |
Start bp | 9053427 |
End bp | 9054143 |
Gene Length | 717 bp |
Protein Length | 238 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 646391260 |
Product | SNARE associated Golgi protein-like protein |
Protein accession | YP_003270959 |
Protein GI | 262199750 |
COG category | [S] Function unknown |
COG ID | [COG0398] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.512855 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCGGCA TGTCGTCGCG CGTGCGGGTA CTCGCCTTTC TCGGGGTCGC GGCGCTGCTG GTCCTCGCCG GTGTGCTGCT GCCTCTGGGA CAGTGGTCCG AATCCCTGGT GACGAGCGTG CGCAGCGCCG GCGCCCTCGG CGCCCTGGTC TACGCCGGCG TGTACGTGCT GGCCACGGTG CTGTGGATCC CCGGCTCGCT GCTCACCATC GGCGCCGGCT TCCTCTACGG TCTGCTCGGC GGCACGCTGC TGGTGCTGCC GGCGGCCACC TGCGGCGCGG CGCTGGCGTT CATTGTCGGG CGCTTCGCGG CCCGCGACTG GGTGCGCGCC AAGGTCCGCG ATCGCCCGCG CATGGCGGCC GTGTACGCGG CCATCGGCGA GCGCGGCTTC TCCATCGTGA TGCTGCTGCG CCTCTCGCCC CTGTTCCCCT TCGTGTTCCT CAACTACGCC CTGAGCCTCA CCGAGCTGCG GCTGCGCGAC TACGTGCTGG CCTCGGCCCT GGGCATGATC CCGGGGACCT TCTTGTTCGT CTACCTCGGC ACCCTGGTGA CCGACGCGGC CGCGCTCGCG AGCGGCCAGC GCCCCGATGG CGGCGGCGCG CAGCAGGCCC TGTTCTGGGG CGGGCTGGTG GCCACCGCCG CGGTCACCTG GTGGGTGTCG CGTCTGGCCC GCCAGCGCCT CGAACGCACG CTCGCCGAGC AATCGAACCA TGCCTGA
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Protein sequence | MAGMSSRVRV LAFLGVAALL VLAGVLLPLG QWSESLVTSV RSAGALGALV YAGVYVLATV LWIPGSLLTI GAGFLYGLLG GTLLVLPAAT CGAALAFIVG RFAARDWVRA KVRDRPRMAA VYAAIGERGF SIVMLLRLSP LFPFVFLNYA LSLTELRLRD YVLASALGMI PGTFLFVYLG TLVTDAAALA SGQRPDGGGA QQALFWGGLV ATAAVTWWVS RLARQRLERT LAEQSNHA
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