Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hoch_5657 |
Symbol | |
ID | 8548071 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haliangium ochraceum DSM 14365 |
Kingdom | Bacteria |
Replicon accession | NC_013440 |
Strand | - |
Start bp | 7763522 |
End bp | 7764298 |
Gene Length | 777 bp |
Protein Length | 258 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 646390325 |
Product | ABC transporter related protein |
Protein accession | YP_003270027 |
Protein GI | 262198818 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.893177 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.229729 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGAGCGCTC CGGCCATCGC CGCCCGCGGC GTCGTCAAGC GCTATGGCGA CGCGGTCGCG CTCGCCGGTG TCGACCTCCG CGTGGAGCGC GGGGAGATCG TCGGTCTGGT CGGCCCCAAC GGCGCCGGCA AGACCACGCT GCTGCGCATC TTGAGCGGCT TTCTCGACCC CGACGAGGGC GCCGTGGACA TCGCCGGCTA CGCCCTGGCT AGCGCGCGCC GGGCCGCGCA GGCCGCGCTC GGCTATCTGC CCGAGGCCGT GCCCCTGTAC CGCGACATGC GCGTGGCCGC GCACCTGGAA TTCGCCGCCA AGCTGGCCGG TGTGGACCGC GACATGATGG ACGAGCGCGT GGCCGAGGCG CTGCGCGCGT GCGAGCTCGA GGACCAGCGC CAGCGCCTGG TCGGCCAGCT CTCCAAAGGC TATCGCCAGC GCGTCGGCCT GGCCTGCGCG CTGGTCGCCG ATCCCGCGGT GCTCATCCTC GACGAGCCCA GCGCCGGCCT CGATCCGGTG CAGACCCGCG GCCTGCGCGC GCTCCTGGAC GCGCAGCGCG CGCGTCGCGG CGTGCTCATC GCCTCGCACG ATCTCGGCGA CATCGAGGCG GTTTCCGACC GCGTGGTCGT ACTCGTGGGC GGACGCGTGG TCGGCGATGA CACCGCCGCC GGGCTGCGCG AGCGTTTGGG CCTGGCCGCC GACAGCTCGC TCGACGAGGT GTTCCTGGTG CTGAGCGGCG CGGCGGCCGA GGCCGCACCC GGAGCGGCGC GCGACGGAGG CGCGTGA
|
Protein sequence | MSAPAIAARG VVKRYGDAVA LAGVDLRVER GEIVGLVGPN GAGKTTLLRI LSGFLDPDEG AVDIAGYALA SARRAAQAAL GYLPEAVPLY RDMRVAAHLE FAAKLAGVDR DMMDERVAEA LRACELEDQR QRLVGQLSKG YRQRVGLACA LVADPAVLIL DEPSAGLDPV QTRGLRALLD AQRARRGVLI ASHDLGDIEA VSDRVVVLVG GRVVGDDTAA GLRERLGLAA DSSLDEVFLV LSGAAAEAAP GAARDGGA
|
| |