Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hoch_5643 |
Symbol | |
ID | 8548057 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haliangium ochraceum DSM 14365 |
Kingdom | Bacteria |
Replicon accession | NC_013440 |
Strand | - |
Start bp | 7747349 |
End bp | 7748248 |
Gene Length | 900 bp |
Protein Length | 299 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 646390311 |
Product | tyrosine recombinase XerD |
Protein accession | YP_003270013 |
Protein GI | 262198804 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | [TIGR02225] tyrosine recombinase XerD |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.776137 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCCGCCG AGCTCGACAT CGACCGCGCG TGCGACCTCT ACTTCCAGCA TCTCAAGGTC GAGCGCAACC TGTCCGTGCA CACGATCGAG GGCTACAGCC GCGACCTCGC CCGGCTGCGG CGGTTTCTCG CCGAGCGCGC GTGCATCGCG GTGGCCTCGG TGCGCCCGGC CGACTTGGCC GATTATCTGC TGGCGTTGGC CGACGAGCTC GGCGCCCGCA GCCGCGCCCG GGCCTCGGCC GCCATCCGCG GATGGTTTCG CTTTTTGGTG AGCGAGCGCT ATCTCGAGCG CGATCCCGCC GAGCACCTGG CCACGCCGCG CGCGCTGCGG CCGCTGCCCG TGGTCATCGG CGAGCAGGCG GTGACCGAGC TTCTGGCCGC GCCGCCGACC ACCACGCCGC GCGGCCTGCG CGACGGCGCC ATGATCGAGA CCCTGTACGC CACCGGCCTG CGCGTGTCCG AGCTGGTCGG TCTGCTGATG GCCGACGTGC ACCTCGATCC CGGCTATCTG CGCGTGCTCG GCAAGGGCCG CAAGCAGCGC CTGGTGCCGC TGGGCGAGAT GGCCTGCGCG CGCATCGAGG CGTACGTCAG CGGCGCCCGC GGCTCGTTCC TCAAGAACCC CAAGCAGCCG GCGCTGTTCT TGACCGGGCA CGGCAAGCCC ATGACTCGCC AGGGCTTCTG GAAGCTGCTC AAGCGCTACG CGCGCGGCGT GGGCATCGCC GAGATCTCGC CGCACAAGCT GCGGCACTCC TTCGCCACCC ATCTGCTCGA GCACGGCGCC GACCTGCGCG CGGTGCAGGC CATGCTCGGC CACGCCGACA TCTCGACCAC CCAGATCTAC ACCCACGTGA GCCGGGCCCG CCTGGTGGCG CTGTATGAGA AGCACCATCC GCGGGCCTGA
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Protein sequence | MAAELDIDRA CDLYFQHLKV ERNLSVHTIE GYSRDLARLR RFLAERACIA VASVRPADLA DYLLALADEL GARSRARASA AIRGWFRFLV SERYLERDPA EHLATPRALR PLPVVIGEQA VTELLAAPPT TTPRGLRDGA MIETLYATGL RVSELVGLLM ADVHLDPGYL RVLGKGRKQR LVPLGEMACA RIEAYVSGAR GSFLKNPKQP ALFLTGHGKP MTRQGFWKLL KRYARGVGIA EISPHKLRHS FATHLLEHGA DLRAVQAMLG HADISTTQIY THVSRARLVA LYEKHHPRA
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