| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_5614 |
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| Symbol | |
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| ID | 8548028 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | - |
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| Start bp | 7708575 |
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| End bp | 7710293 |
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| Gene Length | 1719 bp |
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| Protein Length | 572 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 646390285 |
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| Product | thymidylate kinase |
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| Protein accession | YP_003269987 |
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| Protein GI | 262198778 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0125] Thymidylate kinase |
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| TIGRFAM ID | [TIGR00041] thymidylate kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.2019 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCGTCG TATTCGAGGG GATTGACGGC AGCGGCAAGA CCACGGTCTC CAACAAGGTG
GCCAAGGTCT TGCGACGCCG TGGTTTGGCG GTAGAGCACG TGCGCGAAGG CGGAGAGTTC
GCCTCGCCGC TGGTCGGCCG GATGCGCGAG TTCGGCAAGG ATCCGCGCAA CATGGCGATG
GCGCCGCTCA CCGAGCTTCT GTTCTACGTG GCCCGGGACG CGCAGCTTCT GGCCGAGTGC
ATTCAGCCGG CGCTGCGCCG GGGGGGCCTG GTGTTCGCCG ACCGCTATCT GTACTCCTAC
GAGGTGCTCA GCCACCACGG GCGCGGTGTG CCCATGGACC AGGTGCGGCC CATCCTCGAC
GCGGTGTCCG GGGGCGTGTG GCCCGATCTC GTGGTGTATC TCGACGTCGA GCCCACCCTG
GCGCGCGCGC GCCGCAAAGT CGGCAAGCTG ATCAAGAAGT CCAAGGGCGG CAAACCCGGC
GGCGGCAGCC GCAAGGGCCT GCAGGGCGTC GGCACCCAGC ATCGGCTGCG CGCCGGCTAT
CTGGAGTTGG CCGAGCGCGA TCCCGAGCGC TGGCTGGTCG TGGACAACGC CGACGTGCTC
AGCCCGGAGA GTCGCCTCGA CGCCATCGTG CAGCGCATCG CCGGCGCCAT CGAGCGCATC
TGGCAGGGGC AGCGCATCAG CGAGGTCGTG CGCAACGCCG CGGTCGAGCC CGGTCCGCGC
ATCGCGGCCG AGACCCCCGA GCTCGAGGCC GGGCGCGATG CCTTCTTCCA GTTGATCGAG
GCCCGCGCCG CGCGCGAGCT GCCCATCGCC GCCTACCTGC TCGCCGGCAT CGGCGGCGAG
CGCGCCCACG ATCTGCGCGA GAGCTGGGCA CAGAAGTCGC CGCACATGGT CGCCTACGGC
CTGCGCGGGC TGGCCGACGA TCGCGCCTGG GAGCTGCGCG AGCGGCTGCG CGAGCGCACC
CCGTACTTCG TCGCCCGTTC GCTCGACGGC CGCGCCGTGC AGCTCGACCC GCGGGTCGAG
CAGATGCGCC GCGAGTTTGT CGACAGCCAG CCGCAGGCGG TGCTCAGCAC CATCGACAGC
GTCGACACCG AGGCCGCCTG GGAGCTGCGC GAGCGCCTGG CCGAGAGGGC TCTGCCCGAG
GTGCTCACCA CGCTCAAGCG ATTGCCCAGC GATCGCGCCT GGGAGCTGCG TTCGCGCCTG
GAGTCGCAGG TCAGCGATCC CATGGCCATG GCGCCGCTGG TGAGTTCGAT CCGCGGCCTC
GCCGACGATC GCGCGTGGGC CATTCGCGAC CGCTATCTCG ACGTCTTGCC CAGTCAGGTG
CTGGCGTCGC TGAGCGGTGT CGAGGACGCG CGCTCGTGGG TGCTGCGCTC GCGCTTCGCC
AGCCAGGCGC CCAAGATCGT CCTGCGCACC ATCGACGGCA TGGATGACGC GCGCGCCTGG
GCGCTGCGCC GCGTGTACGC GCCGCGCGTC AAAGAGGCCC TCGACTCCAT GGTCGGCCTC
GACAGCGATG TCGCGTGGGC CATCCGCGAC GAGTGTCTTT CTATCTGGCC ATCGACGACG
ACCAAGTCGT TGGGATTGCT GGCCTCGAGC GAACGCGGCA GGGAGATGGT GCGCGAGGCA
CTCGCGCAGC ATCCCGAGGA CATCTCCCTG CTCAAACACG TGACACGTCT GGCCGGTCGC
ACCGCGGGAA GGCTGCCCGG TCTCGAGAAG GTGGGGTGA
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| Protein sequence | MFVVFEGIDG SGKTTVSNKV AKVLRRRGLA VEHVREGGEF ASPLVGRMRE FGKDPRNMAM
APLTELLFYV ARDAQLLAEC IQPALRRGGL VFADRYLYSY EVLSHHGRGV PMDQVRPILD
AVSGGVWPDL VVYLDVEPTL ARARRKVGKL IKKSKGGKPG GGSRKGLQGV GTQHRLRAGY
LELAERDPER WLVVDNADVL SPESRLDAIV QRIAGAIERI WQGQRISEVV RNAAVEPGPR
IAAETPELEA GRDAFFQLIE ARAARELPIA AYLLAGIGGE RAHDLRESWA QKSPHMVAYG
LRGLADDRAW ELRERLRERT PYFVARSLDG RAVQLDPRVE QMRREFVDSQ PQAVLSTIDS
VDTEAAWELR ERLAERALPE VLTTLKRLPS DRAWELRSRL ESQVSDPMAM APLVSSIRGL
ADDRAWAIRD RYLDVLPSQV LASLSGVEDA RSWVLRSRFA SQAPKIVLRT IDGMDDARAW
ALRRVYAPRV KEALDSMVGL DSDVAWAIRD ECLSIWPSTT TKSLGLLASS ERGREMVREA
LAQHPEDISL LKHVTRLAGR TAGRLPGLEK VG
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