Gene Hoch_5578 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_5578 
Symbol 
ID8547992 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp7658784 
End bp7660292 
Gene Length1509 bp 
Protein Length502 aa 
Translation table11 
GC content66% 
IMG OID646390251 
Producthypothetical protein 
Protein accessionYP_003269953 
Protein GI262198744 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGGCG ACTACCCGAG AACCATGGCC ATTACTTCCA GAGATTCCAA CCGCACTCCC 
GAGCCGGTCC AGTGTCTGCT CATTCTCGAC CTGTTCGACG AAAATACCTA CAGCGAACGC
AGCTTTGCCG AGCACTTGCC GCCGAGCGAA CGCCGCCGAT GCTATCGCGC CACCGGATTC
GACGCGAAGC GCAGGCCGCA CGATCAAGCG CTGCCGTCGC GCGACTGGCG CGCGTGGCAG
CGCGCGATCG ACGACATGGT CGACGCGGCG CGAGGCGAGC TGGGCGACGA CGAGGAACTC
GCCCACTACT ATGTGACCGG CCGCGCGCCG CTGCCCGCCT TTGCTCACCT GGGTATGCGG
CTCAGCGCGT TCGCGCGCAT CTCGATCGTG CACTTGCGCG AGGGCCAAGC CTGCACGCTC
ACACCGTGCA CACCGCCGCT CGGTGCCAAG CTCGCCGAGG AGCCGCCCTT TTTCGACCGA
GTGACCGGAC TTGAGCGCGT CGAGGCCTAC GCCACCGGCC GCGTCGCCGT GTGGATCTCC
ACGCAGAGCG AGGTCGACCG GGCCGCCATC CGCGCTCAGC TCGGCGAAGT GCCGATCGTG
TCGCTGTTCG CCACGCCTGC CGAGCAAAGC TCCGACAATC CCCAGCGCCA CCTGACCCCC
GCGGACGGCC CGCGCGTCGC CGCAGAGCTA TTCAAGCGCA TGCGTCAGTT GCACAACTGC
TATCCGCGCC GCAGCGGCAT CACGATGTTC CTCTCGGGGC CCAATATCCT CGCCACCATG
GTCGGACGCG CGCTCAACAG GCGCCTGCAC TGCCCGGTAG CGTGGCCCAA CTACTACCGA
GCGTATCAGG GCTATCGGCC AGCGATGATG TCCCCGTGGC CGCGCGTGGA GGGCAAAGCC
CGCCTGCTGC TGATCGTCGC ACATACCGCG GACAGCAGTC GCCGACGCCT CAACTCCGAC
GAGGAGCTGC GCAACATGTA TCAGTCGCTG CTCAGCAAGC CTATGAGGGA TCGCTGCGAG
CTGCGCCTGC TGCCGGCTGC GCGTCTGAGC GATTTCACCA GCGCCCTGCG CGACTTCCGC
CCGCATATCG TCCATCTCAT CGGCCACGGC GCACACGGCG GCCTGTACTT CGTCGACGAG
CGGCAAGATG GCCAGTTCGT GAGCAGCGAG GCGCTGTGCG AGCTGCTCGA GGTCGCCGAA
CTCAACGATC TCCAGCTCGT GCTGCTCAAC GCGTGCAACT CGGAGTACAC GGCCGAGCTC
ATCAGCAAGT CGCTGCCGTG TACGACCATC GGCACCAAGC TCAAAGTCCC CGACGGCACC
GCCACCAGCT TCTCATTCCG CTTCTACGAC GACCTCGCCG CCGGTAGCTC GGTGGCTCAC
GCGTTTCATC GCGCCCTCGG CGAAATCAAA GCCGGCCCCA GCGAGCACGC CGATAGTTAC
TATCTGTGCC CGGCAGCGAC GCGTGAAGGT GCCGAGTTGG TTATCTTCGC ACCGGAAGAG
GCCACCTGA
 
Protein sequence
MAGDYPRTMA ITSRDSNRTP EPVQCLLILD LFDENTYSER SFAEHLPPSE RRRCYRATGF 
DAKRRPHDQA LPSRDWRAWQ RAIDDMVDAA RGELGDDEEL AHYYVTGRAP LPAFAHLGMR
LSAFARISIV HLREGQACTL TPCTPPLGAK LAEEPPFFDR VTGLERVEAY ATGRVAVWIS
TQSEVDRAAI RAQLGEVPIV SLFATPAEQS SDNPQRHLTP ADGPRVAAEL FKRMRQLHNC
YPRRSGITMF LSGPNILATM VGRALNRRLH CPVAWPNYYR AYQGYRPAMM SPWPRVEGKA
RLLLIVAHTA DSSRRRLNSD EELRNMYQSL LSKPMRDRCE LRLLPAARLS DFTSALRDFR
PHIVHLIGHG AHGGLYFVDE RQDGQFVSSE ALCELLEVAE LNDLQLVLLN ACNSEYTAEL
ISKSLPCTTI GTKLKVPDGT ATSFSFRFYD DLAAGSSVAH AFHRALGEIK AGPSEHADSY
YLCPAATREG AELVIFAPEE AT