Gene Hoch_5528 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_5528 
Symbol 
ID8547941 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp7586872 
End bp7587390 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content68% 
IMG OID646390201 
ProductFHA domain containing protein 
Protein accessionYP_003269904 
Protein GI262198695 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.566617 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCACG CACGCCACCC GCACCGCGTC GCCGCCGCAG AAGAATCCCG CCCTGGTGGT 
TTGCGTGTTC TGCGCGAGCG CCGCGTGTTT CCGCTCATCG ACCCGGCCAC ACCCGGCTGG
CACCCCGAGC CTATCCTCAT CGGTCGCGAC AGCACCTGCC AGCTACAGCT CCTCGACGTC
ACCGTGTCCG CCATCCACTG CACGCTGGTG GCTGCCGAAG GCCGCTATCT ACTGCGCGAT
GCCGACTCGC GCAACGGCCT CGAAGTGAGC CATCTCAGCG CCCTCGACGG ATTCGTCCAG
GTGTCCCAAG TCGTCTTGAA ACCCGGCCTA CACCTCCGTC TCGGCACCGT GCAGCTCGCG
GTCCTCGACC AGGAGGGCCA GTGCCCACTC AAGGCCCGCA ACCTCCCCGA CTTCTTCGCC
CAGGCGCAGC TCGTCTACGG CTCGCGCGAC GAAGCCGCCC GCAGACTCGG CCTGTCCGCC
GATGATCTGC GCGAGCTGCT GCCGGGTCGG CGCCGGTAG
 
Protein sequence
MNHARHPHRV AAAEESRPGG LRVLRERRVF PLIDPATPGW HPEPILIGRD STCQLQLLDV 
TVSAIHCTLV AAEGRYLLRD ADSRNGLEVS HLSALDGFVQ VSQVVLKPGL HLRLGTVQLA
VLDQEGQCPL KARNLPDFFA QAQLVYGSRD EAARRLGLSA DDLRELLPGR RR