| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_5498 |
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| Symbol | |
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| ID | 8547911 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | + |
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| Start bp | 7543810 |
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| End bp | 7545441 |
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| Gene Length | 1632 bp |
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| Protein Length | 543 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 646390171 |
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| Product | ribonuclease, Rne/Rng family |
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| Protein accession | YP_003269874 |
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| Protein GI | 262198665 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1530] Ribonucleases G and E |
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| TIGRFAM ID | [TIGR00757] ribonuclease, Rne/Rng family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.490736 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGAAA ACCTTTTGGT TGTGAATGCG GAAGGCCCGG AGACGCGGGT CGGGGTCGTC
CACGAGGGCA CCCTCTCTGA GTATTTCGTC GAGTCCAAGC GCGACCGCGG AATCGTCGGC
AACATTTATC GCGGCCGCGT TTCGCGTGTG CTCCCGGGCA TGCAGGCGGC CTTTGTCGAT
CTCGGCCCAA CGGTCGAGCG CGCCGGCTTC CTGTACGTCG CCGACATCCT CGGCGCCGCC
GACGAGCGCA AGCTCTTCGC CGACGAGGAC CCCGACAGCG ACGACGCGCC CGAGGGCACG
GCCGCCCGCC TGGCGCGCTC GCGCAAGCGC GCCAACGCCA ACCGCAAAAT CGAAGATCTG
CTCAAGGCCG ACCAGGAGGT TCTCGTCCAG GTCGTCAAAG AGCCCATCGG TCTCAAGGGC
GCGCGCCTCA CCGGCTATCT ATCGCTGCCC GGCCGTTACA ACGTGTTCAT GCCCGCGGTG
CAGCAGGTGG GGGTATCGCG GCGCATCTCG TCCGAGGCCG AGCGCCGCCG CCTGCGCAAG
ATCGTCACCA GCGTCGGTCA CAAGTCGGGC GGCTTCATCG TGCGCACGGC GGCCGAGGGC
GTCGTCGATC AGGAGATCCG CGACGACGTC GATTACCTGC TGCGGCTGTG GAGCGAGATC
CAGCGCCGCG AGCGCAGCAT GAAGGGCCCG GGGCTGATCT ACGCCGATCT CGACCTGGTG
TTGCGCACCA TCCGCGATCT GCTGCGCGCG GACACCAAAG AGATCGTCAT CGACGACGAA
GAGCAGTACG ACCGCGCGCG CAAGTTCACG ATGGCCTTCT TGCCCCCGGC CGTGGACCGC
ATCAAGCAGT ACCGCGGACG CCAGCCGATC TTCGACCACT ACGGCGTCGA GGCCGAGCTG
CGCACCGCGC TGGGCCGGCG CGTCGAGCTC AAGTCGGGCG GCTCGCTGGT CATCGACCAG
GGCGAGGCGC TCACCGCCAT CGACGTCAAC ACCGGCAGCT TCGTGGGCAA GCGCGACCTC
GAAGAGACCG TCACCAAGAA CAATATCGAG GCCTGTCGCG AGGTCGCCCG CCAGCTCCGG
CTGCGCAATA TCGGCGGCAT CATCGTCATC GACTTCGTCG ACATGGACAA AGAGAACAAC
CGCAAGAAGG TCTGGGACAT CCTCAACCAG GCCCTGGCCA GCGACCGCTC GCGCTGCAAC
CTGACCAAGA TCAGCGAGCT CGGTCTGGTC GAGATGACGC GCAAGCGCAC GCGCGAGTCG
CTCAATCAGC TCCTCACCGA GGCCTGCCCG ACCTGCTCGG GCAGCGGCGT GGTCAAGTCC
ACGACCACGG TGGCCCACGA GGTGCTGCGC GAGGTGCGCC GCCTCGGCAG CCACGCCGAG
GCCGACTCCA TCGACGTCGA GTGCGCGCCC GTGGTCGCCG ATCTGCTCGA CAAGTACGAG
CGCGGCTACC TCGACGAGCT CGAGAAGAAG TTCCAGAAAA AGGTCGTGAT TCAGAGCAAT
GGCGGCTACC GCCCCGACCA GTACCAGGTC ATGGGCCGCG GCCAGCAGAC CGGCAGCGAG
CGATCGCCCT CGGGTTCGCG CGGGCGCAAA CGCGGCCGTC GGCGCGGCGG CAAGAGCTCG
AGCGCGAGCT GA
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| Protein sequence | MSENLLVVNA EGPETRVGVV HEGTLSEYFV ESKRDRGIVG NIYRGRVSRV LPGMQAAFVD
LGPTVERAGF LYVADILGAA DERKLFADED PDSDDAPEGT AARLARSRKR ANANRKIEDL
LKADQEVLVQ VVKEPIGLKG ARLTGYLSLP GRYNVFMPAV QQVGVSRRIS SEAERRRLRK
IVTSVGHKSG GFIVRTAAEG VVDQEIRDDV DYLLRLWSEI QRRERSMKGP GLIYADLDLV
LRTIRDLLRA DTKEIVIDDE EQYDRARKFT MAFLPPAVDR IKQYRGRQPI FDHYGVEAEL
RTALGRRVEL KSGGSLVIDQ GEALTAIDVN TGSFVGKRDL EETVTKNNIE ACREVARQLR
LRNIGGIIVI DFVDMDKENN RKKVWDILNQ ALASDRSRCN LTKISELGLV EMTRKRTRES
LNQLLTEACP TCSGSGVVKS TTTVAHEVLR EVRRLGSHAE ADSIDVECAP VVADLLDKYE
RGYLDELEKK FQKKVVIQSN GGYRPDQYQV MGRGQQTGSE RSPSGSRGRK RGRRRGGKSS
SAS
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