Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hoch_5487 |
Symbol | |
ID | 8547900 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haliangium ochraceum DSM 14365 |
Kingdom | Bacteria |
Replicon accession | NC_013440 |
Strand | + |
Start bp | 7528942 |
End bp | 7530060 |
Gene Length | 1119 bp |
Protein Length | 372 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 646390160 |
Product | Mandelate racemase/muconate lactonizing protein |
Protein accession | YP_003269863 |
Protein GI | 262198654 |
COG category | [M] Cell wall/membrane/envelope biogenesis [R] General function prediction only |
COG ID | [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.111107 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.112319 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCACC TCGACGGGCC TCTGGGCCGG GACGCGCTGC GCATCGAATC GCTGACCGGG GCGCCGCTGA GCGCGCCGCT GCTCGCGCCC TTCGTCATCG CCAGCGGCCG CCTCGACGCG GTCGAAAACG CCGCCGTGTG CGTGCGTCTG GCCGGCGGTG CCTGCGGCTG GGGCGAGATT CCCGTGCTCG CGCCGGTGAC CCGCGAGAGC CGCGATGAGG CCCTGGCCGC GCTCGAGCGC GTGGCCGCCT GGATGTGCGG CCGCGACGCC GGCCGCTGGC GCGCGCTCGC CGGCGAGCTT TGCGAGCGCG AACCCGAGCT GGCGGCCACC CGCGCCGGCC TCGAAATGGC ACTCATCGAC GCTGTGTGCC GAGCCCACGG GCTGCCGCTG TTTCGCTTTT TCGGCGGCGT GGACGACAAC CTGTGCACCG ACATCACCAT CCCCATCTGC GCCGCAGACG AGGCCGAAGC CCTGGCCCGG CAGTACGCGG CCGCGGGTTT CTCGACCATC AAGACCAAGA TCGGACACCA GGTCGACGCC GACGTCGAAC GCCTGCGCGC CATCCGCCGC GGCCACCCGG CGTGTCGCTT CATCGTCGAC GCCAACGAGG GTTACAGCGC CGATGACGCC CTGCGCGCGC TCGCCGCCAT GCGCCGCGCC GGGGTCACGC CGGCGCTGTT CGAGCAGCCC GTGGCCCGCG CCGACTGGGA CGGTCTGGGC CGCGTGAGCG CCGACGGCGG CGTGCCCGTG GCCGCCGACG AGTCGTGCCG CTCGGCCGCG GACGCGCTGC GCATCGCGCG CGACGGCTTG GCCCAGGTGC TCAACATCAA GATCGCCAAA TGCGGCGTGG CCGAAGCCCT CGACATCGCC GCCGTGGCCC GCGCCGCCGG CCTCGGCCTG ATGATCGGCG GCATGGTCGA GACCCGCCTG GCCATGGGCT TTAGCGCCCA CTTCGCCGCC GGTCTGGGCG GGTTCGCGTG GGTCGACCTC GACACCCCGC TGCTCCTGGC CAAGGATCCC GTGCGCGGCG GCTATCGCGC CCGCGGCCCG CGCTACCAGC TCGGCCGGGA GCCCGGACAC GGCGCCGAAC CCGCGTGGAC GAAAACCCCG ACGCCGTGA
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Protein sequence | MKHLDGPLGR DALRIESLTG APLSAPLLAP FVIASGRLDA VENAAVCVRL AGGACGWGEI PVLAPVTRES RDEALAALER VAAWMCGRDA GRWRALAGEL CEREPELAAT RAGLEMALID AVCRAHGLPL FRFFGGVDDN LCTDITIPIC AADEAEALAR QYAAAGFSTI KTKIGHQVDA DVERLRAIRR GHPACRFIVD ANEGYSADDA LRALAAMRRA GVTPALFEQP VARADWDGLG RVSADGGVPV AADESCRSAA DALRIARDGL AQVLNIKIAK CGVAEALDIA AVARAAGLGL MIGGMVETRL AMGFSAHFAA GLGGFAWVDL DTPLLLAKDP VRGGYRARGP RYQLGREPGH GAEPAWTKTP TP
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