Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hoch_5380 |
Symbol | |
ID | 8547792 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haliangium ochraceum DSM 14365 |
Kingdom | Bacteria |
Replicon accession | NC_013440 |
Strand | - |
Start bp | 7397379 |
End bp | 7398347 |
Gene Length | 969 bp |
Protein Length | 322 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 646390053 |
Product | ABC transporter related protein |
Protein accession | YP_003269757 |
Protein GI | 262198548 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0478769 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.847068 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGAGCTA TCGAGACCAG CGGGCTGAGC AAGTCCTACG GCGACGTCCG GGCGCTTCGC GATGTGTCCT TCTCGATCGA GAAGGGCGAG ATCATCGGTC TGCTCGGTCC CAACGGCGCG GGCAAGACCA CGCTGATGAA GATCCTCACC GGCTACATGC AGGCCGACGA AGGTCAGGCG CAGGTTGCCG GCATCGACGT CGCCGACGAT CCCCTGGGCG TGCAGGCGCG CATCGGTTAT CTGCCCGAGA ATGCGCCCGT ATACCGCGAC ATGACGGTGC GCGAGTACCT GATCATGATG GCCGAGCTGC GCGACCTGCC GGGCGAGAAG CTGGGCGGGC TCATCGGCGA GGCCATCGAG GCCACCGGCC TGGGCGGCTA CGTCGATCGC CTCATCGGCA ATCTGTCCAA AGGCTACCGC CAGCGCGTGG GTCTGGCCCA GGCGCTGCTG CATCAGCCCG AGCTGCTGAT CCTCGACGAG CCCACCACCG GACTCGACCC CACGCAGATC GTCGAGATCC GCGAGCTCAT CAAGAACCTG TCCAAGCGGT CGACCATCCT GCTCTCGACC CACATCCTGC CCGAGGTCGA GATGACCTGC GAGCGGGTGC TGATCATCAT CCGCGGCCAG CTCCGCGCCG ACGCCAAGCT CGAGGAGCTG CGCGCGGCCA ACGCGGCCAT CGTCGCCATC GAGGAGCAGG ACGACGCCGG CGAGGTCGAG CGCGCGCTGC GCGGCATCGA GGGCGTGGAC GGCGTGGAGC AGCGCGAGGC GGCCGGTGGC TTTCGCCGCT GGCGGGTGAC CAGCGACAGC AATGACGCGC TGTGCCCGGC GGTGTTCGAC CTGATGCGCG AGCGCGCCTG GCGGGTCTCG GAGCTGCGTT CGGACGCGCG TACGCTCGAG ACCGTGTTTC GCGAACTCGC CAACGCGCCC AGCGCCGCGG CCGTCGCCTC CGAGGAGGTT CGCCCGTGA
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Protein sequence | MRAIETSGLS KSYGDVRALR DVSFSIEKGE IIGLLGPNGA GKTTLMKILT GYMQADEGQA QVAGIDVADD PLGVQARIGY LPENAPVYRD MTVREYLIMM AELRDLPGEK LGGLIGEAIE ATGLGGYVDR LIGNLSKGYR QRVGLAQALL HQPELLILDE PTTGLDPTQI VEIRELIKNL SKRSTILLST HILPEVEMTC ERVLIIIRGQ LRADAKLEEL RAANAAIVAI EEQDDAGEVE RALRGIEGVD GVEQREAAGG FRRWRVTSDS NDALCPAVFD LMRERAWRVS ELRSDARTLE TVFRELANAP SAAAVASEEV RP
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