Gene Hoch_5123 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_5123 
Symbol 
ID8547534 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp7062476 
End bp7063180 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content76% 
IMG OID646389799 
ProductMotA/TolQ/ExbB proton channel 
Protein accessionYP_003269504 
Protein GI262198295 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0811] Biopolymer transport proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGCTCG GCCACCTGCT CGCAGCGGCC GGCTGGCCGA TGCTGCCCAT CTACGCGTGC 
TCGGTGCTCG CGGTGGCAGC CTTTGCGCGA AAGCTGTGGA CCTGGCGGCG GCTCGGCCTC
GAGCGCATGG GCTGGCTGGA GCCGGTGCTC GCGTCGCTGT CGGCCGGGGC CCTCGAGCGC
GCCGCCAGCG AGGCCCGAGG CGTCGCCCAT CCCGCGGCGC GCGCGGCCGC CGCCGCCATC
GCGGTGCTGC CGCGGCGCCC GGATCGCGCT CGCGCCGAGG GCGCGCGCGT GGCCAGCGAG
GAGCTGCAGC GCTTTGAATC GTCGCTGGGC CTGCTGTCGT TTACCGCCCA GGCGGCGCCG
CTGCTCGGCC TGCTGGGCAC GGTCATCGGC ATGGTCGGCG TGTTCATCGA CATGGGCCAG
GGCGCGGACG CGGCCGCGCG CAGCGTCGAT GTCGGACACC TGTCCTCGGG CATCTGGACC
GCGCTGCTGA CCACCGCGGC CGGCCTGATC GTCGCCGTGC CCACGCTGGC CGCGCACGGC
TATCTCAGCG CCTGCGCCGA GCGTCTGCGG CTGCGCCTGC ACGACACCCT CGAGCGCGTG
CTCACCGCGG CGCCGCCCGC AGGAGCGACG GACGCCGCAG CATCGCCGAC ACAGCCCAGC
GAGACCGCCG CACCGGCTCC GGCGTCGCTG GCGGCGGCGC CGTGA
 
Protein sequence
MRLGHLLAAA GWPMLPIYAC SVLAVAAFAR KLWTWRRLGL ERMGWLEPVL ASLSAGALER 
AASEARGVAH PAARAAAAAI AVLPRRPDRA RAEGARVASE ELQRFESSLG LLSFTAQAAP
LLGLLGTVIG MVGVFIDMGQ GADAAARSVD VGHLSSGIWT ALLTTAAGLI VAVPTLAAHG
YLSACAERLR LRLHDTLERV LTAAPPAGAT DAAASPTQPS ETAAPAPASL AAAP