| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_5117 |
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| Symbol | |
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| ID | 8547528 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | - |
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| Start bp | 7049948 |
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| End bp | 7052353 |
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| Gene Length | 2406 bp |
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| Protein Length | 801 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 646389793 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_003269498 |
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| Protein GI | 262198289 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.820743 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCACGCA TCGGCAAGGG CGCTTTGCGC GCCCTCTTGA GTGGGCTCAC GGCCTGTTTG
ACACTCGCCC CCATGGCGGC GCTTGCCCAG GTCGAGGCGC CAGCGCCGAC TGCGGCGGGC
GCGCAATCGG CCACGCTTCG CGGCGTGGTT CTCGACCCGG AGACCGGCGT ACCCATCGAG
GGCGCCACCG TGATCGTGCT GGGCACCGAT CTGGCCACCG TGACCGAGGC CGACGGTTCC
TATGAGATCG TCGGCGTCCC GGCCGGCACC CAGCAGGTGC AGGTGGTGCT CGATGATCAC
GTCGAGGAGC CGGTGACCGT CGAGCTCAGC GCCGGCCAGA CCCTGGTGAG CGAGCTGGCG
GCCAAGCCCA GCTCGCTGGC GGGCGAGGTC ATCGTGGTCA CGGGTACGCG CTCGCCGGAG
AAGATCTTCG ACGCGCCGGT GACCGTCGAG GCCGTGGGCG AAGAGGTCAT CGCGCGCACC
GCGGGCCCGA CCTATCTGTC GTCGCTGTCC AACGTCAAAG GCATCGACTT CGCCAACGCC
GGCCTCAACG ACCAGCGCAT CTCGATGCGC GGGTTCACCA CGCAGTTCAA CTCGCGGCTC
ATCACCATGG TCGACGGCCG CCTGGCGCAG AGCCCGGGCA ACGGTCTGCC GCAGGCCAAC
CTGCTGCCGG CGACCACGCT CGACATGAAG GCGATGGAGG TGGTCGTGGG CCCGGCCTCG
GCGCTCTACG GACCCAACGC GCACACCGGC GTCATCAACG TGCTCACCAA GACGCCGTGG
GACGAGTCGG GCGCGGCGCT GTCGCTGCGC GGCGGCACCC AGGACATGAT CGACGGCGCC
GTGCGCCTGG CCGGCACGGT CGGCGAGGAT TTCGGCTGGA AGCTCAACGC GCAGTACATG
CGCGCCGAGG ACTTCGAGAC CGACTGCTCG GCGGGCTCGC CCTTCCGCTA TGGCACCGAC
CTGTGCGAGG CCGACGTGCT CGAGGACTTC CACGTCGACT CGTTCAAGAC CGACGGCAGC
CTGTACTATC GCTTCGGCGA CTGGATGGCC AAGGTCGCGG CCGGCATGTC CGAAAACACC
AGCTTCGGCG CCACCAACGC CGGCCGCAAC CACATCCGCG ACTGGCAGAT CTCGTACCAG
GCGGCGCAGC TCAGCCATCC CAACTGGTAC GCGCAGGTGA CGCGCACGGC CAGCGACGCC
GGCAACACCT ATCAGCTCCA CGGCCTGGTG CAGCAGGCAG CCACGCGCCA GGACGAGGGC
GGCTCGATCG CGCCCGAGGA CCTCGGCGAT CTGCGCTACG CCACGCGCTT CGAAGACGCC
AGCCAGATGC TCGACGGCGA GCTGCAGTAC CGCGAGGAGT TCGTCGGCAT CGAGACCAGC
GTCGGTCTGC AGGCGCGCGC GTACATGCCC GACTCGGGTG GCACCTACCT GGCCGACGCC
GTGGGCACCG ATATCGACGC CCAGGAGGTC GGCGGCTACG TGCAGGCCGA CTACGACCCC
ATCCCCGACA AGCTGCGCGT GGTCGGCGCG CTGCGCGTGG ACACGCACTC GAACTACGAC
CCGCAGGTGA GCCCAAAGCT GGCCGCGGTG CTCGACCTGG CGCCCGGCAG CAAGCTGCGC
GTCGGCTACA ACCGCGCCTT CAAGAGCCCG ACCATCCTCG AGAACTACCT GCTCATCGGC
GGTAACCTGC GCGGCAACCG CGACGGCTAC GTCATCCGCG ACAGCGCCGA CGGTGGCGGC
GGCGTGGTGC AGACCATCGA CCCGCTGGAG CCCGAGCTCG TCAACTCCTT CGAGATTGGC
TACAAGGGCT ACATCGGCCG CACGGTGTTC ATCGACGCCG TGGTCTACGA CTCGTTCTAC
CGCAACTTCA TCGGACCGCT GTCCCAGGTC GCCGACGGCC AGGACACCTT CGGCTACACC
AGCGACGGCC AGCTCGTCGA GAACGGCAGG CTGCTCACCT ATCAGAACTT CGGCGCGGCC
GAAGTCCGCG GCGCCGATAT CGGTGTGTCG GTGCACGCCA ACGAGTATCT GTCGCTGTCG
GCGAGCACCT CGTTCATCGG CATGGTGTCG AACGGCGAGG AGGCGCCGCC GCTCAACGTG
TCGCCGGCGA AGTTCAAGTT CTCGGTCACG GGGGAAAATC TGTTTCTCGA CAACACCTTC
GTCCGCCTGG CCGGCCGCTA CAGCAGCGCC TACGACTTCG CCTCGGGCGT GTGGGTGGCC
GAGGTGCCGC CGATCTTCGT CGCCGACATC ACCGCCGGCT ACACCTTCAC CGACCTGGGC
GTGTCGCTCA CCGGCGGCGT GATGAACCTG TTCGACAACG ACATCGCCGA GGTCCCGGGC
GCGCCCGTGG CCACGCCCAT GGCGTTTTTG CAGATGAGCT ACGCCTACCA GGGCCTGAAC
TACTGA
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| Protein sequence | MSRIGKGALR ALLSGLTACL TLAPMAALAQ VEAPAPTAAG AQSATLRGVV LDPETGVPIE
GATVIVLGTD LATVTEADGS YEIVGVPAGT QQVQVVLDDH VEEPVTVELS AGQTLVSELA
AKPSSLAGEV IVVTGTRSPE KIFDAPVTVE AVGEEVIART AGPTYLSSLS NVKGIDFANA
GLNDQRISMR GFTTQFNSRL ITMVDGRLAQ SPGNGLPQAN LLPATTLDMK AMEVVVGPAS
ALYGPNAHTG VINVLTKTPW DESGAALSLR GGTQDMIDGA VRLAGTVGED FGWKLNAQYM
RAEDFETDCS AGSPFRYGTD LCEADVLEDF HVDSFKTDGS LYYRFGDWMA KVAAGMSENT
SFGATNAGRN HIRDWQISYQ AAQLSHPNWY AQVTRTASDA GNTYQLHGLV QQAATRQDEG
GSIAPEDLGD LRYATRFEDA SQMLDGELQY REEFVGIETS VGLQARAYMP DSGGTYLADA
VGTDIDAQEV GGYVQADYDP IPDKLRVVGA LRVDTHSNYD PQVSPKLAAV LDLAPGSKLR
VGYNRAFKSP TILENYLLIG GNLRGNRDGY VIRDSADGGG GVVQTIDPLE PELVNSFEIG
YKGYIGRTVF IDAVVYDSFY RNFIGPLSQV ADGQDTFGYT SDGQLVENGR LLTYQNFGAA
EVRGADIGVS VHANEYLSLS ASTSFIGMVS NGEEAPPLNV SPAKFKFSVT GENLFLDNTF
VRLAGRYSSA YDFASGVWVA EVPPIFVADI TAGYTFTDLG VSLTGGVMNL FDNDIAEVPG
APVATPMAFL QMSYAYQGLN Y
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