| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_4979 |
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| Symbol | |
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| ID | 8547387 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | - |
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| Start bp | 6864530 |
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| End bp | 6865558 |
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| Gene Length | 1029 bp |
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| Protein Length | 342 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 646389653 |
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| Product | cysteine-rich repeat protein |
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| Protein accession | YP_003269361 |
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| Protein GI | 262198152 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02232] Myxococcus cysteine-rich repeat |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.734088 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGACGA TGAGCGCTTC CATCCCGCGA ACCCGCGCCG TACTCGGCGC GGTGTTCGCC
GTCGGCGCCA TGCTCGCGCT CGCCGGCTGT TTCAACCAGG GCACGCAGGC GACCGACTGT
CCGACCGGCG TGACCTGCGC GCCCGGCTGG GAGTGCGCGG CTGCGCAGGC TGCGTGCATC
CTCGACGGCT GCGGCAACGG CCGCGTGCAA TACGAGCGCG GCGAGGTCTG CGACGACGGC
AACATCCTCG ACGGCGACGG CTGCAGCGCC GATTGCCTGT CCAACGAATC CTGCGGCAAC
GGATATACCG ACGTGAGCGA GGACTGCGAC GAGGGCGACG ACGACCTGGT GTGCGACGGT
GACTGCACCG TGCCCGTATA CGGCGACGGC GTGGCCGACA ACACCGCCGC CTGCGATCGC
GACTGCAGCT TTCCGCGCTG CGGCGACGGT GTGTTCAACG AGTTTCACCT GGTGCAGCCC
GATGACGGCG GCGCCGCGTA CCTGGAAGCG TGCGACGACG GCAACGACGA GAACCGCGAT
GACTGTCTCG ACGTCTGCCT GGCCGCGCGC TGCGGCGACG GCTTCGTCCA CAGCTTGGGC
GCCGGCGGCG AGACCTGCGA CGTCGACGTG GACGGCGACG GCGTGGCCGA CAACGTCGCC
GCGTGCGACA GCGATTGCAC GGCGCCCGCG TGCGGCGACG GCGTGCACAA CGCCGCGGCC
GGGGAAGCCT GCGACGATGG CAACGAGGAC GATGGCGACG CCTGCGTCAG CGGCTGCGCG
GCCGCGCGCT GCGGCGACGG CTTCGTCTTC GAGGGCGAGG AGCTATGCGA CGACGGCAAC
GCCAGCAACG GCGACGCGTG CCCCACGGGC AGCGGCGGGA GCTGCGAGCC CGCGCGCTGC
GGCGACGGCT TCATCCAGGC CGGCGTCGAG CAATGCGACG TCGGCAACGG CGCCGTGGAT
ACGTGTGCGG GCGGATCGGA ATGCCAGCCA CCAAATCTTC CCGGTGCTTG TTCTTGCCAA
TTCACCTAG
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| Protein sequence | MATMSASIPR TRAVLGAVFA VGAMLALAGC FNQGTQATDC PTGVTCAPGW ECAAAQAACI
LDGCGNGRVQ YERGEVCDDG NILDGDGCSA DCLSNESCGN GYTDVSEDCD EGDDDLVCDG
DCTVPVYGDG VADNTAACDR DCSFPRCGDG VFNEFHLVQP DDGGAAYLEA CDDGNDENRD
DCLDVCLAAR CGDGFVHSLG AGGETCDVDV DGDGVADNVA ACDSDCTAPA CGDGVHNAAA
GEACDDGNED DGDACVSGCA AARCGDGFVF EGEELCDDGN ASNGDACPTG SGGSCEPARC
GDGFIQAGVE QCDVGNGAVD TCAGGSECQP PNLPGACSCQ FT
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