| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_4978 |
|---|
| Symbol | |
|---|
| ID | 8547386 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haliangium ochraceum DSM 14365 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013440 |
|---|
| Strand | - |
|---|
| Start bp | 6863835 |
|---|
| End bp | 6864521 |
|---|
| Gene Length | 687 bp |
|---|
| Protein Length | 228 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 646389652 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003269360 |
|---|
| Protein GI | 262198151 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.492471 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.718613 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGAAAC GACTGGGGAT CATCGTATTG GCTGGGGCAG CCATCATAGC GCTGCCGACG
GCGGCCATCG GCGACGTCGA ACATGAGTTG CATATAGGGG CCCAGAGTGG TGCGGTCTGG
TCAGAATTAT TTCGCTCGGA GCCGATCTCC AGTCCTAACG AAGCGACCTA CAACCGCCGC
TTCTTCGGCG GTCTAGCTCT GCGTCTGAAT ACCAATGCGT GGGACTGGTT GAGTCTCGGG
GCGCAACTAG AACTGCAATA CGATCGGAAA GGGGCTCGAA TAGAGAGCGG AGGTGTTCGG
GTGGGCGACC GGTATCTCAA CTATCTGGAT GTTCCCCTGC TGGTTCGAGC GACCTTTTCG
CCTTCGCGAT ACGCGAAACC CTATTTCGCT GCGGGACCTC GATTAGGCGT ATTGGTAGGG
GCCGAGCGTG AGGACTTCAA TGGCAATATT CAGGACCAAT CCGATTTCTA TGACTCTGTC
GACTTCGGGG TTCATGTTGC GTTGGGTGTA GGAGTCCAAT TGAATGAGCG ACTCACGGTA
GAGATCGAGG GGCGATACGA TGTAGGGCTC AGCGATGTGG ACAGCGCCAG CGCGCAGCCC
GGCCTGCGCA ATCGCTCGTT CTTTCTCGTG CTCGGCGTGG ACTACGAACT CTGGCGCTCG
GGCGGGTCGG GGGAGCCGCC GCGCTAG
|
|---|
| Protein sequence | MSKRLGIIVL AGAAIIALPT AAIGDVEHEL HIGAQSGAVW SELFRSEPIS SPNEATYNRR
FFGGLALRLN TNAWDWLSLG AQLELQYDRK GARIESGGVR VGDRYLNYLD VPLLVRATFS
PSRYAKPYFA AGPRLGVLVG AEREDFNGNI QDQSDFYDSV DFGVHVALGV GVQLNERLTV
EIEGRYDVGL SDVDSASAQP GLRNRSFFLV LGVDYELWRS GGSGEPPR
|
|---|
| |