| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_4973 |
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| Symbol | |
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| ID | 8547381 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | - |
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| Start bp | 6855832 |
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| End bp | 6857322 |
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| Gene Length | 1491 bp |
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| Protein Length | 496 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 646389647 |
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| Product | DNA photolyase FAD-binding protein |
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| Protein accession | YP_003269355 |
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| Protein GI | 262198146 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0415] Deoxyribodipyrimidine photolyase |
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| TIGRFAM ID | [TIGR00591] photolyase PhrII |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.179925 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGAATT CGCTCCCTCC CGTGCCGGCG CTGCGCGTGC GCGCCGTCGG CGATGCGCCG
GTGCACGAGT CGCGGCGCTT TGTCTTGTAT TGGATGATCG CGGCCCGGCG CACGCGCTAC
AACTTCGCGC TCGAGCGCGC GCTGGCCTGG TCGCGCGCGC TGGGCAAGCC GCTGGTGGTG
CTCGAGGCCT TGCGCTGCGA CTATCCCTGG GCGAGCGAGC GCCTGCACCG CTTCGTCGTC
GACGGGATGT CCGATCAATC GGCCGCGTTC GCGGATACCC CGGTGGCCTA CTATCCCTAC
CTCGAACCGC GTCCCGGCGC GGGGCGCGGG TTACTGGCCG CGCTAGCCGC GCACGCCTGC
GTGGTGGTCA CCGATGAGTT TCCGTGCTTC TTCCTGCCGC GCATGGTGGC CGCAGCCGCG
CGCTCGCTCG ACGTGCAGGT CCAGGCGGTG GACGGCAATG GTCTGTATCC GCTGGCGGCG
ACCGAGCGGG TGTTCACCAC CGCGGCCTCG TTTCGCCGCC ATCTGCAGAA AGAGCTGCCC
GCGCATCTCG GCGATATGCC GATGGCCGAG CCGCTCGCGC ACGCGCCGCC ACGGGACGCC
GCCCACGCGC TGCCGGCCGC GATCCGCAAG CGCTGGCCGC CGGCATCGCT TGGGCGTCCC
GGCGCAAGCG ACGCGCTGCT GAGCGCGTTG CGTTTCGACC GCGCGGTCGA AGCTGCGCCC
GTCCGCGGCG GGGCGCGGGC GGCGGGCGAG ACCCTGGAGC GCTTCGTACG CGCCGGTCTG
CCGCGTTACC TCGAGGCCCG CAACCAGCCC GCGGACCCGG TCACCAGCCA GCTATCGCCG
TATCTGCATT TCGGACACAT CTCGGCGCAC GAGGTGTTCC GCCGGGTCAT GGCCCGCGAC
CAGTGGACGC CGGATCGTAT GGCCCCGCGC GCGACCGGCA GCCGCGAGGG CTTCTGGGGC
GCCAGCAGCG AGGTCGAGGG TTTTCTCGAT GAGCTCATTA CCTGGCGCGA GATCGGCTAC
AACATGGCCG CCAAGCGCGA TGACTACGAT CGCTACGAGT CGCTGCCGGC GTGGGCGCAG
ACCACGCTCG AGGAGCACAC AGGCGACCCG CGGCCGCATC TCTACGAGCT CGACGAGTTC
GAGCAGGCGC GCACGCACGA CGCGCTGTGG AACGCAGCCC AGACGCAGCT CGTGCGCGAG
GGCCGCATCC ATAACTACAT GCGCATGCTG TGGGGCAAGA AGATCCTCGA GTGGACGCGC
ACGCCGCGCG ACGCGCTGGC GGTGATGATC GAACTCAACA ACCGCTACGC GCTCGACGGC
CGCAATCCCA ACTCGTACAG CGGCATCTTC TGGTGCCTGG GCCGCTACGA CCGCGCCTGG
GGGCCAGAGC GCCCGATCTT CGGCAAGGTG CGCTTCATGA GCTCGCAGAG CACGGCGCGC
AAGCTGCGCG TCACACCCTA CCTCCACGCC TACGCGCCCG CCGAAAGCTG A
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| Protein sequence | MANSLPPVPA LRVRAVGDAP VHESRRFVLY WMIAARRTRY NFALERALAW SRALGKPLVV
LEALRCDYPW ASERLHRFVV DGMSDQSAAF ADTPVAYYPY LEPRPGAGRG LLAALAAHAC
VVVTDEFPCF FLPRMVAAAA RSLDVQVQAV DGNGLYPLAA TERVFTTAAS FRRHLQKELP
AHLGDMPMAE PLAHAPPRDA AHALPAAIRK RWPPASLGRP GASDALLSAL RFDRAVEAAP
VRGGARAAGE TLERFVRAGL PRYLEARNQP ADPVTSQLSP YLHFGHISAH EVFRRVMARD
QWTPDRMAPR ATGSREGFWG ASSEVEGFLD ELITWREIGY NMAAKRDDYD RYESLPAWAQ
TTLEEHTGDP RPHLYELDEF EQARTHDALW NAAQTQLVRE GRIHNYMRML WGKKILEWTR
TPRDALAVMI ELNNRYALDG RNPNSYSGIF WCLGRYDRAW GPERPIFGKV RFMSSQSTAR
KLRVTPYLHA YAPAES
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