Gene Hoch_4949 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_4949 
Symbol 
ID8547357 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp6824435 
End bp6825178 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content69% 
IMG OID646389623 
ProductCDP-alcohol phosphatidyltransferase 
Protein accessionYP_003269331 
Protein GI262198122 
COG category[I] Lipid transport and metabolism 
COG ID[COG0558] Phosphatidylglycerophosphate synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCACGC TGGGCGAGAT CGCTGCCATC TACCGGGCAT CCAAGAAGAA GCGCGATATC 
AACTGGTGGA CCGAGTGGGT CTGCCGTCCG CCGGCCGCGG CCCTGGTCTA CCTGCTGCGG
CCCACGCGCG TGACCCCCAA CCAGGTCACC TTCGCCTCGC TGATCATCTG CGCGCTCGCA
GGCGCCATGC TGCTGCTCGG CGACGGCTAC CTGTGGGTGC TGGCGGCCAT GCTGGTGTTC
GAGCTGTCGT TCGTGCTCGA CTGCGTCGAC GGCCAGCTCG CGCGCCTGCG CCAGCAGAGC
TCGGTGCTCG GGCATCTGCT CGATTTCCTC ATGGACGAGA TCAAGGCGTT CCTGATGTTC
GGCTGCGTGG CCGTGCATCT GTGGCGCTTC TCGGGCGACC CTCTGTACCT CCTGGTCGGC
ATCGGCGGCC TGTTCGCGCT GGCCACCGGC ATCGCCTTCA CCACCTTCAT GCGCCGGCCC
GAGTACGGCG CGCCGCCGCC TACATCCGAC GGCCAACCGG CCGTGATCCC GCGCCGCACC
GGCGCCATCG GCCTGGCCAT CTCCGCGCTC GAGCACGCCG CGCGCTTCGT CGTCCACTAT
CCGAGCTACA TCTTTCTGCT CGCCCTGGTC GGACGCATCG ACATCTATTT CTGGGCCTAC
GCGGCCGTCA ACTGCCTGTA CGCGCTGCGC TGCCTGGCTC AGGTGGCCCT GCGCCTGGGT
CGCAGCGCGC CGCCGCAGCC CTGA
 
Protein sequence
MSTLGEIAAI YRASKKKRDI NWWTEWVCRP PAAALVYLLR PTRVTPNQVT FASLIICALA 
GAMLLLGDGY LWVLAAMLVF ELSFVLDCVD GQLARLRQQS SVLGHLLDFL MDEIKAFLMF
GCVAVHLWRF SGDPLYLLVG IGGLFALATG IAFTTFMRRP EYGAPPPTSD GQPAVIPRRT
GAIGLAISAL EHAARFVVHY PSYIFLLALV GRIDIYFWAY AAVNCLYALR CLAQVALRLG
RSAPPQP