Gene Hoch_4937 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_4937 
Symbol 
ID8547345 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp6812499 
End bp6813083 
Gene Length585 bp 
Protein Length194 aa 
Translation table11 
GC content65% 
IMG OID646389611 
ProductTM2 domain containing protein 
Protein accessionYP_003269319 
Protein GI262198110 
COG category[S] Function unknown 
COG ID[COG2314] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATCCCA ACACCGTGGA CAAACCCGAC GATTCAGAGC GCGTGATGCT CGTCCCCATC 
CAACACGAGA TGGACGCGCA ATCGCACAAC AAGGGCCTGG CCTTCGTGCT GTGGCTCTCC
TGTCTTTTCG GCCTCTGCGG TGTTCATCGC TTCTATCTCG GCCGCCCGGT GAGCGGCATC
CTGTACCTGC TCACCTTCGG CTTCTTCGGC ATCGGCCAGC TCGTCGATCT CTTCCTGCTG
CCCTCGATGG TCGACGAGGA GAACACCAAG CGCGCGGCGC TCAAGGCGCT GGCCGAGAAG
CGCGCGCTGC ACGCCGGACC GCGCTACGGC CAACTGCCGG CCATGCTGCC GCCGGCCCCG
CAGGAGGCCG CGCCGACGCC CGAGAAGGTG CGCATCAAGC TGGTGCAGGC GGCCGCCAAG
TACGGCGGCA AGCTCAGCGT CACCCAGGGC GTGATGGCCA CCGGCAAGTC GTTCGAAGAG
GTCGAAAACA TCCTCGATAC GATGGTCCGG AGCGGCTACG TGGACGTCAC CAACGACGAG
AACACCGGCG TCGTGGTCTA CGACTTCGGC CAGCTTCAGC TCTGA
 
Protein sequence
MHPNTVDKPD DSERVMLVPI QHEMDAQSHN KGLAFVLWLS CLFGLCGVHR FYLGRPVSGI 
LYLLTFGFFG IGQLVDLFLL PSMVDEENTK RAALKALAEK RALHAGPRYG QLPAMLPPAP
QEAAPTPEKV RIKLVQAAAK YGGKLSVTQG VMATGKSFEE VENILDTMVR SGYVDVTNDE
NTGVVVYDFG QLQL