| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_4860 |
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| Symbol | |
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| ID | 8547267 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | + |
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| Start bp | 6708829 |
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| End bp | 6710121 |
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| Gene Length | 1293 bp |
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| Protein Length | 430 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 646389533 |
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| Product | phosphatidylserine decarboxylase-related protein |
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| Protein accession | YP_003269242 |
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| Protein GI | 262198033 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0688] Phosphatidylserine decarboxylase |
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| TIGRFAM ID | [TIGR00163] phosphatidylserine decarboxylase precursor |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.0399088 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTACGAAC TCAGCGAAAG CGCGCTCGAA GAACGCTACC AGCACCATTT CGGACGCCGC
GCCGGCTATC TGCCGCGCGA CCGCGGCGCT CTCGACGAAT GGCTGCGCAC GCTCAAGAGC
GAGCTCGCGG CCAAACCGGC GCCCGCGGCG ACCGCCCTCA GCCCGGCAGT CGCCGGCCTG
GCCAAGCTCA TCGAGACCGA CGGCATCGTC CGCATGTACG TAAACGAGAT GATCTCCCAG
GTCCCGGCCG CGCATCAGAC GGTCACGTCC ATCCCCGAGC TGCTCCAGGC GCTGCAGCAC
ATCTCCACGA CGGCCCCGCT CTACAACCCC GACCCGGATA AGCGCAACTT CTTCCCGATG
TCGTCGCTCT TCGTCTACAT GATGATGACG CCGGCCGGCG AGGCGATCTT CCGCAACACG
GCCTTCAACG ACTCGCTGCG CGCCATCCTC AAAGAATGGT GCAACTTCCT CGACAGCTCC
GATAGCCAGT ACGTGCTCAA CACCGGCGAA TTCGGCTGGC TCTCGCCCTC GGCCTACGAA
TACAACAAGC TCGAGGAGTT CGTCATCCCC GACCCGGGCG CACCGCACTG GGGCTTCTCC
TCCTTCAACG ACTACTTCCA CCGCCAAATC AAATCCGAGT GTCGCCCGGT CGATGCCCCC
GGCGACAGCT CGGTGGTGGT CTCGGCCAAC GACGGCACGG TGTACAAGAT CGCCCGCAAG
GTGAGCGCCC AGGCGGAGTT CTGGCTCAAG GGACAACCGT ACTCGCTGAT CGACATGCTC
GGCACCACGC CCTATGCCGA GCGCTTCGTC GGCGGCGATG TCTTCCAGTC GTTCCTCAGC
GGCGCCGACT ACCACCGCTG GCGCGCGCCC ATCGCCGGCA CAGTGCGCTA CGCCGAGGTG
GTCGAAGCGC TGATGTTCAG CAACGCAGAA TCGGCCGGCT ACGATCCCAC GGCCGGCACC
TTCTCCCAGG GCTATCAGTC AGCGGTCAAT ACCCGCGGCC TGGTCATCAT CGAGAGCCCC
GACCCGAGCA TCGGCATGGT CTGCGTCATG CCCATCGGTA TCACCGAGAT CTCGTCGGTG
AGCATCCAGG TTGCTCCGGG CACGGTGGTC GAAAAAGGCG AGGAGCTGGG CTATTTCAGC
TACGGCGGCT CGAGCATGTG TCTGATCTTC CAACCCGGCG CCATCGACCA GTTCACGGTC
TCGGGTCCCG AGCCGGGCGG CAACCCGGAC GACGGTCCGC CCATCGAGGT CAACGCCCGC
ATCGCTATCG CCACTACCTC AGCGAGCGAG TGA
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| Protein sequence | MYELSESALE ERYQHHFGRR AGYLPRDRGA LDEWLRTLKS ELAAKPAPAA TALSPAVAGL
AKLIETDGIV RMYVNEMISQ VPAAHQTVTS IPELLQALQH ISTTAPLYNP DPDKRNFFPM
SSLFVYMMMT PAGEAIFRNT AFNDSLRAIL KEWCNFLDSS DSQYVLNTGE FGWLSPSAYE
YNKLEEFVIP DPGAPHWGFS SFNDYFHRQI KSECRPVDAP GDSSVVVSAN DGTVYKIARK
VSAQAEFWLK GQPYSLIDML GTTPYAERFV GGDVFQSFLS GADYHRWRAP IAGTVRYAEV
VEALMFSNAE SAGYDPTAGT FSQGYQSAVN TRGLVIIESP DPSIGMVCVM PIGITEISSV
SIQVAPGTVV EKGEELGYFS YGGSSMCLIF QPGAIDQFTV SGPEPGGNPD DGPPIEVNAR
IAIATTSASE
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