Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hoch_3921 |
Symbol | |
ID | 8546317 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haliangium ochraceum DSM 14365 |
Kingdom | Bacteria |
Replicon accession | NC_013440 |
Strand | + |
Start bp | 5403922 |
End bp | 5404812 |
Gene Length | 891 bp |
Protein Length | 296 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 646388593 |
Product | ABC-3 protein |
Protein accession | YP_003268313 |
Protein GI | 262197104 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1108] ABC-type Mn2+/Zn2+ transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.200349 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACCCGT TCGCGCAGCC GCAGCAGGGT CCGAGCTGGG CCGACTTCGT CGCCGCCTGG GAGCTGTTCC GCGACCCCGT GCTCAGCGCC GGCATCGCCG GCCTGGTGCT CGGCTTCCTG GCCGTGTACG TGGTCCTGCG GCGCATGGTC TTCGTCAGCG CCGCCGTCAC CCAGGGCGCC GGCCTGGGCG TGGCCCTGGC CTTCTACGCC GCCATCCACC TCGGCATCGA CATCGACCCC GGCCTCGGCG CCGTGGCCAC CGCCCTGCTC ATCGCCGGTC TGCTGGTGCT CGACCCCGGG CGCCTGGGCC TCAGCCGCGA GACCGTGCTC GGCCTCGCCT TCGCCCTGTG CGGCGGCGGC GCCGTGCTCG TGGGCGCGCG CATCAGCCAG GAGGCCCACG ACATCCAGGC CATCCTCTTC GGCATCGGTG TCATGGTCGC GCCCGAGGAT CTGCGCGCGA TCGAGATCGC GGCGCTCGCG CTCATGCTCG TGCACCTGTG GCTGTTTCGC GGCCTGTGCT TTGCCAGCTT CGACCCCGTG GCCGCGCGCG TCCAGGGCCT GCCCGTGCGC GTGCTCGACG CCGTGCTCCT GGCCTCGCTC GGCATCATGA TCGGCGTGGC CGCGCGCGCC CTGGGCTCGC TGCCCGTGTT CGCGCTGTCG ACCATGCCGG GCGCCGCCGC CGTGCTCCTG GGCCGCGGCC GGCTGGCGCT CACCTTCGCC CTGGCCGCCG CGCTCGGCAG CGCCGCCGGC GTCGGCGGCT ACCTGCTCGC GTTCTTCTGG GAGCTGCCCG TGGGTGGCGC CCAGACCGTG CTCGCCGTCG TCATCGCCAT CGCCGCCGCC CTCGCCCTCG CCGCCGCGCG CGCGCTCGCC GGCCTCATGC GCCGCGGCTG A
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Protein sequence | MDPFAQPQQG PSWADFVAAW ELFRDPVLSA GIAGLVLGFL AVYVVLRRMV FVSAAVTQGA GLGVALAFYA AIHLGIDIDP GLGAVATALL IAGLLVLDPG RLGLSRETVL GLAFALCGGG AVLVGARISQ EAHDIQAILF GIGVMVAPED LRAIEIAALA LMLVHLWLFR GLCFASFDPV AARVQGLPVR VLDAVLLASL GIMIGVAARA LGSLPVFALS TMPGAAAVLL GRGRLALTFA LAAALGSAAG VGGYLLAFFW ELPVGGAQTV LAVVIAIAAA LALAAARALA GLMRRG
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