Gene Hoch_3921 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_3921 
Symbol 
ID8546317 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp5403922 
End bp5404812 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content75% 
IMG OID646388593 
ProductABC-3 protein 
Protein accessionYP_003268313 
Protein GI262197104 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1108] ABC-type Mn2+/Zn2+ transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.200349 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACCCGT TCGCGCAGCC GCAGCAGGGT CCGAGCTGGG CCGACTTCGT CGCCGCCTGG 
GAGCTGTTCC GCGACCCCGT GCTCAGCGCC GGCATCGCCG GCCTGGTGCT CGGCTTCCTG
GCCGTGTACG TGGTCCTGCG GCGCATGGTC TTCGTCAGCG CCGCCGTCAC CCAGGGCGCC
GGCCTGGGCG TGGCCCTGGC CTTCTACGCC GCCATCCACC TCGGCATCGA CATCGACCCC
GGCCTCGGCG CCGTGGCCAC CGCCCTGCTC ATCGCCGGTC TGCTGGTGCT CGACCCCGGG
CGCCTGGGCC TCAGCCGCGA GACCGTGCTC GGCCTCGCCT TCGCCCTGTG CGGCGGCGGC
GCCGTGCTCG TGGGCGCGCG CATCAGCCAG GAGGCCCACG ACATCCAGGC CATCCTCTTC
GGCATCGGTG TCATGGTCGC GCCCGAGGAT CTGCGCGCGA TCGAGATCGC GGCGCTCGCG
CTCATGCTCG TGCACCTGTG GCTGTTTCGC GGCCTGTGCT TTGCCAGCTT CGACCCCGTG
GCCGCGCGCG TCCAGGGCCT GCCCGTGCGC GTGCTCGACG CCGTGCTCCT GGCCTCGCTC
GGCATCATGA TCGGCGTGGC CGCGCGCGCC CTGGGCTCGC TGCCCGTGTT CGCGCTGTCG
ACCATGCCGG GCGCCGCCGC CGTGCTCCTG GGCCGCGGCC GGCTGGCGCT CACCTTCGCC
CTGGCCGCCG CGCTCGGCAG CGCCGCCGGC GTCGGCGGCT ACCTGCTCGC GTTCTTCTGG
GAGCTGCCCG TGGGTGGCGC CCAGACCGTG CTCGCCGTCG TCATCGCCAT CGCCGCCGCC
CTCGCCCTCG CCGCCGCGCG CGCGCTCGCC GGCCTCATGC GCCGCGGCTG A
 
Protein sequence
MDPFAQPQQG PSWADFVAAW ELFRDPVLSA GIAGLVLGFL AVYVVLRRMV FVSAAVTQGA 
GLGVALAFYA AIHLGIDIDP GLGAVATALL IAGLLVLDPG RLGLSRETVL GLAFALCGGG
AVLVGARISQ EAHDIQAILF GIGVMVAPED LRAIEIAALA LMLVHLWLFR GLCFASFDPV
AARVQGLPVR VLDAVLLASL GIMIGVAARA LGSLPVFALS TMPGAAAVLL GRGRLALTFA
LAAALGSAAG VGGYLLAFFW ELPVGGAQTV LAVVIAIAAA LALAAARALA GLMRRG