| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_3848 |
|---|
| Symbol | |
|---|
| ID | 8546241 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haliangium ochraceum DSM 14365 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013440 |
|---|
| Strand | - |
|---|
| Start bp | 5299165 |
|---|
| End bp | 5299434 |
|---|
| Gene Length | 270 bp |
|---|
| Protein Length | 89 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 646388517 |
|---|
| Product | ribosomal protein S15 |
|---|
| Protein accession | YP_003268240 |
|---|
| Protein GI | 262197031 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0184] Ribosomal protein S15P/S13E |
|---|
| TIGRFAM ID | [TIGR00952] ribosomal protein S15, bacterial/organelle |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.194686 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.297176 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCAGTAT CACCAGCGAG AAAGCTCGAG ACTATCGAGC AGCACCGGTC GCACGGGGCG
GACACCGGTT CTCCCGAAGT TCAGATCGCT CTGCTCACGC AGCGGATCGT CCACCTCACC
GAGCACCTCA AGGTGCATCA CAAAGATCAT CACTCGCGCC GCGGGTTGCT CAAGATGGTC
GGCAAGCGCC GCAGCTTGCT CGACTATCTC AAGCGCAAGA ACTACGGGCG CTACCAGAGC
ATCATCCAAA CGCTCGGCAT CCGCCGCTGA
|
|---|
| Protein sequence | MPVSPARKLE TIEQHRSHGA DTGSPEVQIA LLTQRIVHLT EHLKVHHKDH HSRRGLLKMV
GKRRSLLDYL KRKNYGRYQS IIQTLGIRR
|
|---|
| |