| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_3740 |
|---|
| Symbol | |
|---|
| ID | 8546131 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haliangium ochraceum DSM 14365 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013440 |
|---|
| Strand | - |
|---|
| Start bp | 5143691 |
|---|
| End bp | 5144533 |
|---|
| Gene Length | 843 bp |
|---|
| Protein Length | 280 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 646388408 |
|---|
| Product | stationary-phase survival protein SurE |
|---|
| Protein accession | YP_003268133 |
|---|
| Protein GI | 262196924 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0496] Predicted acid phosphatase |
|---|
| TIGRFAM ID | [TIGR00087] 5'/3'-nucleotidase SurE |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.18688 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.856186 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAAGCCC AAGCCATGAA GCCGCTGGTT CTACTCTCCA ACGACGACGG CATCGGCTCT
CCGTACTTGC AGGCGCTCGC CGACGCGCTC GATGCCACAG GCGAGGTCGA GACCTTGGTG
GTCGCGCCCG AGCGCCAGCG CTCCGCGGCC TCGCACGCGA TCACGCTGCA CAAGCCGCTG
CGGCTGCACA AACACGGCGA GCGGCGCTTC TCGCTCAGCG GCACGCCGGT CGATTGCGTG
TACGTCGGGC TCATCAAGCT CGCCGAGCGC GCGCCGGCGC TGGTGCTCTC CGGCATCAAT
CGCGGCTACA ACCTCGGTCT CGACGTCTTT TACTCGGGAA CGGTGGCCGC GGCCGTCGAG
GGGGGTCTGC GCGGTGTGCC CGCGATCGCG CTGTCGCTCG CGCCCGAGGA GCGCGCTGAT
CTGCAGTCGG CGCTGCGCTT CTCCGTCGCG CTGGCGCTGC AGGTGGTGGC CAACCCGCTG
CCGCCGCTCA CGGTTCTCAA CGTCAATTTT CCCGTCCAGC CGGACGAACG CTGGGCGTGG
ACGGGTCTCG GCAAGCGCGC CTACGAGGAC GATGTGCACG AGCGCTTCGA CCCGCGCGGC
CAGCCGTACT ACTGGATCGG TGGCGGCAGC GCGGAGCTCG GCGACGATCG CTGCACCGAC
TGCGCCGCCA TCGGCGCCGG CATCACCACG GTGACCCCGC TGCGGCTCAA CTTGTCGGGA
CACGGCCTGC TGGGCGCCGA CGCGGCGAGC GAGCACGGAT GGTCGCCGGC GGGCTATCGC
CTGGTGCCCG AGGCGTCCCA GGTGCCCGAG GCGCCCAAGG TTCGGAGCGA CGGGGCGGAG
TAG
|
|---|
| Protein sequence | MQAQAMKPLV LLSNDDGIGS PYLQALADAL DATGEVETLV VAPERQRSAA SHAITLHKPL
RLHKHGERRF SLSGTPVDCV YVGLIKLAER APALVLSGIN RGYNLGLDVF YSGTVAAAVE
GGLRGVPAIA LSLAPEERAD LQSALRFSVA LALQVVANPL PPLTVLNVNF PVQPDERWAW
TGLGKRAYED DVHERFDPRG QPYYWIGGGS AELGDDRCTD CAAIGAGITT VTPLRLNLSG
HGLLGADAAS EHGWSPAGYR LVPEASQVPE APKVRSDGAE
|
|---|
| |