| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_3734 |
|---|
| Symbol | |
|---|
| ID | 8546124 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haliangium ochraceum DSM 14365 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013440 |
|---|
| Strand | - |
|---|
| Start bp | 5138015 |
|---|
| End bp | 5138665 |
|---|
| Gene Length | 651 bp |
|---|
| Protein Length | 216 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 646388401 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003268127 |
|---|
| Protein GI | 262196918 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0461] Orotate phosphoribosyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.245551 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCAGGTCA CGGACGCGCG ACGACTCGGA CAACTCATTG TCTCTCCCCA AGAGGCGCGC
GCGCCCCGGC TCATCGAGAT CATGCGCGAC GCGGGCGCGC TGCTCGAGGG CCACTTCGAG
CTGGATTCCG CGCGCCATGC GCCCTACTTC ATCCGCTTCA GTCAGATCGG TTGGAAGCAG
GCGCTGGTCG ACGAGGTCGC CGAGTACCTG CTCGAGGCCG CCGGTTTTGC CAGCGCCGAA
GCCACCATTG TCTGCGCCGA GACCTCAGCG ATCTTTCTGG CGCGTGCGCT GGGACGCAAG
ACCGGCAACC CGGTCGCGGT CACCGCGGTG GACGCCACCC GCCAGCCCAC AGACCTGCTG
CGCACCGGCT GCATCGACGA GAGCCGCCCG ATCCTGGTGG TGAGTGACGT CATCACCACG
GGGCGCTCGC TGCTGCCGCT GCTGGGCCTG CGCTCGTCAC CGCGCGACAT CCTCGGCATC
GTCTCCTTTG CCGTTCTGGC GGCGCCGCGC TTCGAGCGCT TTGCCCGCGC CCACAACCTG
CCCTCGGCCT GGTTGATGGC CGCGGGTTGG CAGATTCTGC CGTCCTCGGA GCGCGAGTGC
CCAGGATGCG CGGCGGGCCT GCCGATTCTG CCCGCCAACG AATTCAGCTA G
|
|---|
| Protein sequence | MQVTDARRLG QLIVSPQEAR APRLIEIMRD AGALLEGHFE LDSARHAPYF IRFSQIGWKQ
ALVDEVAEYL LEAAGFASAE ATIVCAETSA IFLARALGRK TGNPVAVTAV DATRQPTDLL
RTGCIDESRP ILVVSDVITT GRSLLPLLGL RSSPRDILGI VSFAVLAAPR FERFARAHNL
PSAWLMAAGW QILPSSEREC PGCAAGLPIL PANEFS
|
|---|
| |