Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hoch_3384 |
Symbol | |
ID | 8545772 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haliangium ochraceum DSM 14365 |
Kingdom | Bacteria |
Replicon accession | NC_013440 |
Strand | + |
Start bp | 4681345 |
End bp | 4682541 |
Gene Length | 1197 bp |
Protein Length | 398 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 646388051 |
Product | WD40 domain protein beta Propeller |
Protein accession | YP_003267779 |
Protein GI | 262196570 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0823] Periplasmic component of the Tol biopolymer transport system |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.749473 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.131149 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGCGCA CATCCGCGGC GCTGCGGAGA CATCGCGGCG CCCAACCCGG CCGCCGCGCC TCGGCGTCTG CGCCGACTGT CCTCGCGGCC GCGCTCGCGG TCGTGCTCGC CAGCGCCTGC GGCAGCGCCG GCGTCGGCCC GCGCGGCGAG TCCACCGCCG GCCCCGAGCG CGAGGCCGAG GCCGAGCCCG CGCAGCCGCC CATCGTGGCC ATGCAGCGGG CGCGCCTGGG CGGACGCCTG GTGTTCATCG ACGAGAGCGG CGTGCGCCGC GGCGACCTCA CCCGCATCGC CCAGGTGCCC GTGCGCGACA ACAGCCCGTC CTGGTCGCCC GATGGCCGCT GGATCGTCTT CGCCTCCTCG CGCGGACGTG AGGACATGAT GCAGACCAGC CTGTGGCTGG TGGCCGCGCG CCTCGACGCC CAGCCCCGGC GGCTCACCAG CGGCGACTTC GAGGATCGCG ACCCGGCCTG GAGCGCCGAC GGCAGCGCCG TGGTGTTCTC CTCCAACCGC GGCGGCAGCT TCGCCATCTG GCGCCAGGAG CTGAGCATGA GCGACTACGG CTGGCCCATC GCCGCCGGCG CGCCCAGCCA GCTCATCGCC AGCGAGCGCG CCGCCTTCCA CCCCGCGCCC GCGCCCGACG GCTCGGCCAT CGCCTACACC GAGGCTGATC TCGAGAGCGG CGCCTCCGAG ATCTGGCTGT GGTCGGCCGG CGAGCGCCAG CGGCTGAGCG AGGGCCCCTC GGACTCGACC CCGGCGTGGT CGCCCGACGG CCGCCGCCTG GCCTTTGCCG GCCTGGTCGA GCGCGAGGGC CAGCCCCCGG ACGTGGATCT GTTCACCATG AACGCCGACG GCAGCGGCCG CGCGCCGCTC ATCGCCGAGC CGCTGGCGCT GCAGACCCAC CCCGTGTGGT CGCGCGACGG TCGCCACCTG TTCGCCACCT CGCTGTATCG CTCGGTCGAT AGCGGCAAGC CCATCCTCTC GTCCATCACC TTCGTCGCCA TCGATGCCGA GGGCCGGGCC GCCTCCACCG AGCTGCGCTC GCTCTCCGAT CCCATGGCCG TGGAGTCGCG GGCCAGCCCC GCGCTCGGCC CCGGCCAACT CGACGCCGCC GCCCTGGCGC GCAATCCCAG CTACGGCGAC GACCTGGCGC GCGCCATCGA GGCCCATCTG CTGCGCCGCG ATCTCGGCGC GCCTTGA
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Protein sequence | MQRTSAALRR HRGAQPGRRA SASAPTVLAA ALAVVLASAC GSAGVGPRGE STAGPEREAE AEPAQPPIVA MQRARLGGRL VFIDESGVRR GDLTRIAQVP VRDNSPSWSP DGRWIVFASS RGREDMMQTS LWLVAARLDA QPRRLTSGDF EDRDPAWSAD GSAVVFSSNR GGSFAIWRQE LSMSDYGWPI AAGAPSQLIA SERAAFHPAP APDGSAIAYT EADLESGASE IWLWSAGERQ RLSEGPSDST PAWSPDGRRL AFAGLVEREG QPPDVDLFTM NADGSGRAPL IAEPLALQTH PVWSRDGRHL FATSLYRSVD SGKPILSSIT FVAIDAEGRA ASTELRSLSD PMAVESRASP ALGPGQLDAA ALARNPSYGD DLARAIEAHL LRRDLGAP
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