| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_3174 |
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| Symbol | |
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| ID | 8545562 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | + |
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| Start bp | 4372532 |
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| End bp | 4374166 |
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| Gene Length | 1635 bp |
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| Protein Length | 544 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 646387841 |
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| Product | TPR domain-containing protein |
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| Protein accession | YP_003267569 |
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| Protein GI | 262196360 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.331835 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.379297 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGATTACAC ACCGCACGCC TCTTCTGTTG CGCCAGGTCT ACCTCGTCCC GCTGTTGGTC
GTAGGGCTGG TGTTGTCGTC AGTGCTGCTG TCGCCGGCGC CGCGGGCCCA GGCCAAGGGC
TCGCTGGCGG GCGAATACAT CAAGGTCGCG CGCATGCTGC GCGACTGGCG ATATGAGGAT
GCGCGTGCGC TGCTGAGGCA GCTCGAGGCG CGGGCCCCCG AGGCCGCTGA GACCCGTTAT
CTCTCCGCCG AGCTGGCATT CTCCAGCGGC GAGTACGAGC GCGCGCTCGA GTTCTTGGTC
GGTCTCGACG ACACCATGGC GGGCGGCAAC GTCGGCATGC TGCGCTCGCT CTCGGCCTCG
AGCCGAGAGG TGACGCGCTC CTTCGTCTCG CGCACCTCGT CCGGCGGACA CTTCGAGATC
TGGTACGCGC CGGGCAAGGA CGAGCTCATC GCCGACCTCG CCGGTGACGT GCTCGAGGCC
GCCTACGACG CGCTCGGCGA TGATCTCGGC TACCGGCCGA GCGAGCCGGT GCGCGTCGAG
CTGCTGGGCG AGTCCGCGGA TCTGGCGCGG CTGTCGCCGC TCACCGAGAC CGAGATCGAG
ACCACGGGCA CGATCGCGCT GTGCAAGTAC AACAAGCTGA TGGTGGTGAG CCCGCGGGCG
ACGCTGTTCG GCTACCCGTG GATGGACACG CTGGTGCACG AGTACGTGCA CTACGTGGTC
TCGCGGCTCA GCCACGACAC CGTGCCGGTG TGGCTGCACG AGGGCCTGGC GCGCTTTCAG
CAGTCGCGCT GGCGGGAGCC GCCGCAGGTG GCGCTGGGCG CCATGGACGC GCAGCTCCTG
GGCTCGGCGA TCAAGCAGCG CTCGCTGATC TCGTTCGACG AGATGCACCC CTCGATGGCC
AAGCTGCCCA GCCAGGAGGC GGCGGCGCTG GCGTTCGCCG AGGTCTTCAC CATGGTCGGC
TATCTGCACC AGGAGATGGG CTACGAGGGC ATCCGCCGCG CCATCGCCGA GCAGCGCGAG
GGCAAGAGCG CGCGCCGGGC GGTGGCCGAC GCCCTGGGCC GGCCCTGGCA GCAGGTCGAG
CGCGACTGGC AGGGCTATCT GCGCAAGCTC GATCTCGCGC CCAAGCGCGG GCCGGCGCCG
AGCGCGCGGC GCATCCGCTT CGACAAGGGC GGCGACCACG ACGAGAACGT GGGCGTCGAG
GAGGTGGGCA ACACCAAGGC GCAGCGCTTC GCCCGGCTGG GCGGGATGCT GCGCGCCCGC
GGCATGCTGG CGGCGGCCGC GCTGGAGTAC GAGAAGGCGC TGGCCTCGGC GCCGAGTCGC
GAGGGCGCGC CCGATCCCTT CGTCGCCGCC AAGCTCAGCC GCACCTACCT CGAGCTCGGG
CGCGCGGACG ATGCCCTGCG CCTGGCCGAG CCGCTGCTCG AGGCCGATGA GAACGACTCC
GCGGCGGCGA TCACCGTGGG CCTGGCGCAC CTGAGCGAGG GCCGCGACGA GGCCGCGCGC
CGGTCCTTCG AGGTGGCCCT GCGCGTGAGC CCCTTCGATC CCACGGTGCG CTGCAAGCTG
AGCGAGCTGT ACGGCAGAGA CGGGCGGGAG GCGCTGGCTC AGCGCGAGGC CGACGCGTGC
GCGCGGTTGC AGTGA
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| Protein sequence | MITHRTPLLL RQVYLVPLLV VGLVLSSVLL SPAPRAQAKG SLAGEYIKVA RMLRDWRYED
ARALLRQLEA RAPEAAETRY LSAELAFSSG EYERALEFLV GLDDTMAGGN VGMLRSLSAS
SREVTRSFVS RTSSGGHFEI WYAPGKDELI ADLAGDVLEA AYDALGDDLG YRPSEPVRVE
LLGESADLAR LSPLTETEIE TTGTIALCKY NKLMVVSPRA TLFGYPWMDT LVHEYVHYVV
SRLSHDTVPV WLHEGLARFQ QSRWREPPQV ALGAMDAQLL GSAIKQRSLI SFDEMHPSMA
KLPSQEAAAL AFAEVFTMVG YLHQEMGYEG IRRAIAEQRE GKSARRAVAD ALGRPWQQVE
RDWQGYLRKL DLAPKRGPAP SARRIRFDKG GDHDENVGVE EVGNTKAQRF ARLGGMLRAR
GMLAAAALEY EKALASAPSR EGAPDPFVAA KLSRTYLELG RADDALRLAE PLLEADENDS
AAAITVGLAH LSEGRDEAAR RSFEVALRVS PFDPTVRCKL SELYGRDGRE ALAQREADAC
ARLQ
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