| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_3149 |
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| Symbol | |
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| ID | 8545537 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | - |
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| Start bp | 4328193 |
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| End bp | 4332323 |
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| Gene Length | 4131 bp |
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| Protein Length | 1376 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 646387816 |
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| Product | ATP-dependent DNA helicase, RecQ family |
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| Protein accession | YP_003267544 |
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| Protein GI | 262196335 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0514] Superfamily II DNA helicase |
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| TIGRFAM ID | [TIGR00614] ATP-dependent DNA helicase, RecQ family |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.212538 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCTAAGA AAACAACCAA GTCGAGCCAG ACGCCGCAGG CTCCCAAGGC AGCGGGCGCA
AACGCGGACG CGCCGACCAA AACCGCATCG GCGGCCAAGC CCGCGGCTAA GAAGACAGCC
AGCAAAAAGA CGGCGGCGAG CAAAGCCGCG GCCGGCGACG ACGCCAAGCC CGCGACGACA
GCGACGGCCA AGCCCGCGGC CAAAGTAGCC GGCAAGAGCG CCGCCAAAGC GGCCAAAACC
GCAACGGCCA CCACCAAGGC CGCATCCAGC AAGAAGAGTA CGAGCGCCAA AGTCAGCGGC
AAGGCGGCCA GCAGCAAGGC TGCGGGCAGC AAGGCTGCGG CGAGCAAGTC GGAGATGAGC
GCGCCGGCGG CCAAGACCGC CAAGGCGACC AAGGCCAAGA CCGCCACGCC AGAGACCGCC
ACGCCCGCGG CCAAAGCGAG CGCCAAGACC GCGACCAAAG CGGCCACCGC CAAGACCGCC
AAAACCGCCA AAACCGCGAG CAAAGTCGCC CAGACCGCGA CTGGAGCGGG CGCGGTCGGT
GCGGCCGAGG CAGCGGCCGG TGCGGCCGCG GGCGCGACCA AGAAGCGCGC CAAGGTCGCG
AGCAAGCGCA GCAGCGCCGC CGCGTCGGCA GCGTCCGCCC CGCTGTCCGA GAACGCCGCC
GCGGCGGCGA GCGCGACCGA TTCCGCCGAT GTGTCCGAAA TCAGCTCAGC GGCTGCTGCC
GCGGCGGCGG CGGAGACGAC GGCGACCGCG ACCGAAGACG GCGCCCTACC CGGCAGATCG
TCCAAGCGTA CGACAGCGGC CAAAGCCGCG CCGGCGGCCG CGGCAAAGTC CGGAAAAAGC
GCCGCGGGCA GCAAGTCCGG CGGCAAGAGC GGCAAAGCGA GCGGGCGCGC CTCGCGCTCG
GCGCGCCCGG TCTGGGAGAC CTACCCCGAG CCCCTGCAAG CGCTCGTCGA GGTCGGCCGC
GAGCGGCTCG GCATCGACAA CCTGCGCCCC GGCCAGAGCC AGGCGCTCAG CCATATCCTC
GCCGGTGAGG ACGTCCTCGC CGTCATGCCC ACGGGCAGCG GCAAATCGCT GCTCTACCAG
CTCCCCTCGC TGATCCTCGA GGGTCTCACC GTGGTGGTGT CGCCGCTGAT CGCGCTCATC
AAAGACCAGA TCGACAAGAT GGTCGAGCGC GGCGTCGATG TGTGCCGGTT CGATTCGACG
CTCACGGTCA AGCAGAAGCG CGAGGCCGAG GAGCTTCTGC GCGCGCCCGG CGGCAAGCTG
GTGCTGGTCA CCCCCGAGCG CATCAGCGAC CCCGACTTCC GCGCGTTCTT GCGCGAGGGC
GCCGGCGGCG TCGGCGTGTC GCGCTTCGTG GTCGACGAGG CCCACTGCGT GTCGCAGTGG
GGCCACGACT TCCGCCCGGC CTACCTCACC CTGCGCAAGG CGCTCGAGGA TCTCGGCCGC
CCGCCGGTGC TGGCCACCAC GGCCACGGCG CCGCCGCACG TGCGCGAGGA CATCCAGCAC
CAGCTCGGCA TATCCGACGC CAAGGTGGTG ACCACGACCT TCGACCGCCC CAACCTGCAC
TTCGAAGTCA TCGTGCTGCC GGGCGAGGAC GACAAGCAGA AGACCCTGGT CACGCTGCTC
AAGAAGCTGC CGCGGCCCGG CGTGGTGTAC TGCGCGACGG TCAAGAAGGT CGAGGAGCTC
TACGAGTCGC TGCACCGCCA CGGTATCCCG GTCGGCCGCT ATCACGGACG CCTGGGCAAA
AAAGACCGCG ACGCCGAGCA GCAGCGCTTC ATGGAGACCA AAGACCAGGT CATGCTCGCG
ACCAACGCCT TTGGTCTCGG CGTGGACAAG GCCAACGTCC GCTACGTGCT GCACTACCAC
GTGCCCGGCT CGCTCGAGGC CTACGCCCAG GAGGCCGGAC GCGGCGGACG CGACGGCAAA
CCCGCGCGCT GCGTGCTGCT GTTCTCGCCC GACGACGTCG CCATTCAAGA GTACTTCCTC
ACCGGCTCCT ATCCCAGCCG CCGTCAGGTG CGCGCGGTCT TCAAGTCGCT GTCGGTGTGG
TCGGCCGAGG ACGACGCGCC GCCGACCCCG GCCAATCTCG CGCTGGGTTC GCGCGTGGGC
ACGCAGCGCA CGCGCACGGT GCTGTCGCTG CTCAAGGATG AGGGCTTCGT GCTCGAGCAC
GAGGACGGCA CCTTCTGGCT CGCCGAGGAC CGGCCCTCCG ACGAGGTGCT CAACGACAAG
GCGCGCCAGT ACGAGGCCCG GCGCATCGCC GACCGCCAGC GCCTCGACGC CCTGCTCAAC
TACGTCAAGG TGCCGGGCTG TCGCAACCAG GCCATCCTCG ATTACCTGGG CGAGCCCGAG
TCGCCGCCCT GCGGGCGCTG CGATAACTGT CAGCGCTCGC GCGAGGTCGC GCTGGCCGCG
GCCGACCAGG CCTCGCGCCT CGAGGCCAAG GTCACGGCCG AACTCAACCA GGACTGGGGC
GCCGGCGAGC GCGAGGACAG CGACGAGTAC AACAAACCGC AGCGCGTGAT CCGCCACCGT
GTGATCCGCA TCGACGAGCC GCCGGCCGAC GGCGGCGAGG CCGGCGCCAG CGAGGCCGGC
GCCAGCGAGG CCGTCGAAGA CGCCGCCGCG AGCGCGAGCC CGGCAGCGGC CACGGCGCGC
GCAGGCGGCA ACGACAAGGC CGCAGACAAG GACCGGGCCA AGGAGAGAGA TAAAGCGCGA
GCGGCGGCCA GCCCGTCTGC CAAGGCCGCG CCGAGCCCGA GCTCGAAAGC CGCGGCCAAG
GCCGCGCCGA GCCCGTCGCC CAAAGCGACG CCCACAGCGT CGCCCAAAGC GACGCCCACA
GCGTCGCCCA AAGCGACGCC CACAGCGTCG CCCAGTGCCT TGGGCACCAC GCCCGCGCCC
GCCCCGACCC CGGCCTCCGC CTCATCCGCG GACGGCGCGG CGGCCGCTCG CTCCGAAGAG
CGCGGCAAAG CCGGACGACG CGGCGGCAGC AACGGCCAGA TGCAGCTCCC GCTCGCCGGG
CAGTCGGCAG AGGACGCGGA GCAGCCGCGG CTCGCGAGGG CGCCCGCCGC CCAGGCCAGC
GAGCAGGCGC TGGTGGCACG CGGCGCGGCG CCGGCAGATG CCGAGGAGGA GCTCGAAGGC
GACGAATTCG CCGCCGACGA GTTCGACGAG GACGCCCTCT ACGACGACGA GTACGACGAA
GCCGACGACG ACGAGTACGA AGACGACGAC GAGTACGAAG ACGACGAGTA CGAGGACGAC
GACGAGTACG ACGACGACGA CGAGTACGAC GACGACGAGT ACGAGGACGA CGACGAGTAC
GACGACGACG ACGAGTACGA GTACGACGAC GAGTACGACG ACGAAGATTT CGAGCTGATC
GAGGGCAAAA CCGCGGCCGC GCTCGCCGAG GAGGGCATCG AGCCCGACCA CGAGATCACC
ATCTTGGCCC GCAAGAAGGT CGAGAAGCCG CCCAAGGGCA AGCAGCGCGC GCAGGACGGC
GAGGCCGCCG CGCAGGACGG CGAGGCCACC GGCAAGCGGC GGCGCAAGCG GCGGCGGCGA
CGCAAGAAGC GCAGCATGCT GCCGCCCAAG TCGGCCTTCA CCAGCCCGGT GCTGTCCAAG
GAAGGCGCGC CCACCCCGCC GAGCAACAAC CGCGGCCGCC GGCGCAAAGT CGCGGGTCCG
GTCATCGAGT ATGTGCGCGG TCCCATGCGC ATCAACATGA CGCCGGTGGC CTCGGCCACG
CCCAACGACG TCGCGCCCGC GCGCAAGAAA AAGCGCCGCC GTCGCCGCGG CGAAGAGGCC
GGCGCGCCTG CGAGCGGGGG CAATGGAGCC TCGGCGAGCG CGGTGGCTTC GGCCTCGCCC
AACGAGGAGC GCAGCGGTCG CCGCCGGCGC CGCCGTCGTC GCAAGCGCTC GGGCGCGCGC
CAGGCCAGCA GCGAGGGGCC GGTGTCGTTC TTCTCGCCGC AGCGCTCGGG CGGCGGCGGA
GAGGGTGGCG CTCGCGAGGA GCCCGGCCGC CGTCGTCGCC GTCGTCGCCG TCGCGGACGG
CGCTCGGGCG GCGGCAATAG CGGCAACAAG GGCAACGGCA GCGGCTCAGG CGATACCCAG
AAGCCGCCGC AGCAGAGCGC GCCGCCGCCC TCGTCCTCGT CGAGCGACTG A
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| Protein sequence | MAKKTTKSSQ TPQAPKAAGA NADAPTKTAS AAKPAAKKTA SKKTAASKAA AGDDAKPATT
ATAKPAAKVA GKSAAKAAKT ATATTKAASS KKSTSAKVSG KAASSKAAGS KAAASKSEMS
APAAKTAKAT KAKTATPETA TPAAKASAKT ATKAATAKTA KTAKTASKVA QTATGAGAVG
AAEAAAGAAA GATKKRAKVA SKRSSAAASA ASAPLSENAA AAASATDSAD VSEISSAAAA
AAAAETTATA TEDGALPGRS SKRTTAAKAA PAAAAKSGKS AAGSKSGGKS GKASGRASRS
ARPVWETYPE PLQALVEVGR ERLGIDNLRP GQSQALSHIL AGEDVLAVMP TGSGKSLLYQ
LPSLILEGLT VVVSPLIALI KDQIDKMVER GVDVCRFDST LTVKQKREAE ELLRAPGGKL
VLVTPERISD PDFRAFLREG AGGVGVSRFV VDEAHCVSQW GHDFRPAYLT LRKALEDLGR
PPVLATTATA PPHVREDIQH QLGISDAKVV TTTFDRPNLH FEVIVLPGED DKQKTLVTLL
KKLPRPGVVY CATVKKVEEL YESLHRHGIP VGRYHGRLGK KDRDAEQQRF METKDQVMLA
TNAFGLGVDK ANVRYVLHYH VPGSLEAYAQ EAGRGGRDGK PARCVLLFSP DDVAIQEYFL
TGSYPSRRQV RAVFKSLSVW SAEDDAPPTP ANLALGSRVG TQRTRTVLSL LKDEGFVLEH
EDGTFWLAED RPSDEVLNDK ARQYEARRIA DRQRLDALLN YVKVPGCRNQ AILDYLGEPE
SPPCGRCDNC QRSREVALAA ADQASRLEAK VTAELNQDWG AGEREDSDEY NKPQRVIRHR
VIRIDEPPAD GGEAGASEAG ASEAVEDAAA SASPAAATAR AGGNDKAADK DRAKERDKAR
AAASPSAKAA PSPSSKAAAK AAPSPSPKAT PTASPKATPT ASPKATPTAS PSALGTTPAP
APTPASASSA DGAAAARSEE RGKAGRRGGS NGQMQLPLAG QSAEDAEQPR LARAPAAQAS
EQALVARGAA PADAEEELEG DEFAADEFDE DALYDDEYDE ADDDEYEDDD EYEDDEYEDD
DEYDDDDEYD DDEYEDDDEY DDDDEYEYDD EYDDEDFELI EGKTAAALAE EGIEPDHEIT
ILARKKVEKP PKGKQRAQDG EAAAQDGEAT GKRRRKRRRR RKKRSMLPPK SAFTSPVLSK
EGAPTPPSNN RGRRRKVAGP VIEYVRGPMR INMTPVASAT PNDVAPARKK KRRRRRGEEA
GAPASGGNGA SASAVASASP NEERSGRRRR RRRRKRSGAR QASSEGPVSF FSPQRSGGGG
EGGAREEPGR RRRRRRRRGR RSGGGNSGNK GNGSGSGDTQ KPPQQSAPPP SSSSSD
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