| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_2720 |
|---|
| Symbol | |
|---|
| ID | 8545107 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haliangium ochraceum DSM 14365 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013440 |
|---|
| Strand | + |
|---|
| Start bp | 3745166 |
|---|
| End bp | 3746908 |
|---|
| Gene Length | 1743 bp |
|---|
| Protein Length | 580 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 79% |
|---|
| IMG OID | 646387413 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003267142 |
|---|
| Protein GI | 262195933 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.44099 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGCGC GCGCGTCGCT GCTGGCCGCG CTGGCGCTGC TGCTGGCGTC GCTGGTGAGC
GCGCGTCTCG GACGGGCGGA CGAACAACCC GCGGCCGAGG CGCTGGCCGG CTCGGCGCTG
GCGGCGCGCG TGCCCACGGG CCCCACGGGG TACGAGCACG CGGCCCACGC CGCGGCCAAC
GCGGCCGCCG GCGGGGCCGA GATTCCGTGT CAGCGCTGTC ACTCGCTCGG CCGTCAGGGC
CAGGTGGCGG CGGTCGGACA CGCGGCCTGT TTCGGCGCGT GTCACGGCGC GGCGCCGCGT
CGCTGGCCGC AGACCTGGGC CTCGGCGGCC GAGGCCGAGC GCCGGCCGCT GTGCCTGAGC
TGCCACAGCG CGGCGCTGTT CGCGCCCGCG GGGCCGGGCG CACCGCCGCC GTCCCGCCGC
TACGCCGCGC CGCGGACGGC GCGCGCGACC CCGGCCTTTG CCCTGCGCAT GTCGCATCTC
GGACACGTGT CCGCGACCGG CGGCAGCGGC GGCTGCACCG CCTGCCACGC GCCCATGAGC
CGCGTCGATC GCGGCGCCCG CGGGCGCGCG GGCGCTCGCG CCGGCGCTGC GAGAGCCGGC
GCCGCTGCCG CCCGGGCGCA CGCGCGCTGC GTCCGCTGTC ACGCGCCGGA CGCGGACGCG
GCGGCCGCCG GCGCCGCGGG GCCGCAGCCG TTGAGCGCGT GCACGAGCTG TCACCAGCCC
GCTGGCGAGG GCCCGGCGCG GCCCAGCCTG ATCGCCTCGG CCGCGCCCGC CGAGTTCTCG
CACGCCCGCC ACAGCGCCCG CGGGCTGAGC GCGTGCGGCG ACTGCCACGA GGCCGTGGCC
GAGGCCGCGG ACAACGCCTT GCCCACGCCC AGCACGGCCG CCTGCGCCAC CTGTCACGAC
GGCGAGCGCG CGTTCTCGGT GCTCACGCCG AGCTGCACGC GCTGCCACAG CGCGCGCCTC
AGCCGCAGCG GGCCCCGGCC GCCGCGCGGA CCCGGCTTCT CGCACGTGAT GCACCGCGCC
CGCGGCCTCG ACCTGCCGTG CAGGCGCTGC CACAGCCTCG ACGCCGCGGG CGTGCCGCAG
CCGCCGGCCA GCGATCACGG CCCGTGTTCG GACGCCGGCT GTCACCGCCG CGAGTTCTCG
TCGGCCGAGC CGATCATCTG CGGCGCCTGT CACGTCGGCA CCGACCCCTC GCGCCCGCTG
TACTTCACGC CGGGCGCGCG CGCCGACACC GAGTTTGGCG CCCGCTACTC GCACCGCGCC
CACCCCGGCG CCAGCGACCA GGCCTGCGCC GGCTGTCACC GCCAGCGCAC GGCGCTGCGC
CAGAGGGGCC TGCCGCGCAC GCACGCGACC TGCAGCGGCG CCGGCTGTCA CGAGCTGCCC
GCCACCGAGG GCGAGGGCGA GGGCGAGGGC GACGACGCCG AGCCGGACGC GGCAACGGCG
CCGCTCCCGC TCACAGCGTG CGAGGGCTGC CATCGCATCG GCCGCGCGGC CGCGCGCCGT
GCGGTGCGTC TGGGCGCGCC CTGGAGCGTG CGCGCGCGCT TCGATCACGA GCGCCACGAG
CGCCCGCCCT TCACCGCGGC GGCGCGCGCG TGCACGAGCT GTCATCAGGA CGTCGCCGCC
GCCGACAGTG TCGAGGCCAT CGCCAGCCCG CCCAAGCAGA GCTGCGCGCC GTGTCACGAC
GGCGGCGCGG CCTTCAAGCT CACCGGCCAC GAGTGCGTCC GCTGCCACGG CCGCGGCCCT
TGA
|
|---|
| Protein sequence | MAARASLLAA LALLLASLVS ARLGRADEQP AAEALAGSAL AARVPTGPTG YEHAAHAAAN
AAAGGAEIPC QRCHSLGRQG QVAAVGHAAC FGACHGAAPR RWPQTWASAA EAERRPLCLS
CHSAALFAPA GPGAPPPSRR YAAPRTARAT PAFALRMSHL GHVSATGGSG GCTACHAPMS
RVDRGARGRA GARAGAARAG AAAARAHARC VRCHAPDADA AAAGAAGPQP LSACTSCHQP
AGEGPARPSL IASAAPAEFS HARHSARGLS ACGDCHEAVA EAADNALPTP STAACATCHD
GERAFSVLTP SCTRCHSARL SRSGPRPPRG PGFSHVMHRA RGLDLPCRRC HSLDAAGVPQ
PPASDHGPCS DAGCHRREFS SAEPIICGAC HVGTDPSRPL YFTPGARADT EFGARYSHRA
HPGASDQACA GCHRQRTALR QRGLPRTHAT CSGAGCHELP ATEGEGEGEG DDAEPDAATA
PLPLTACEGC HRIGRAAARR AVRLGAPWSV RARFDHERHE RPPFTAAARA CTSCHQDVAA
ADSVEAIASP PKQSCAPCHD GGAAFKLTGH ECVRCHGRGP
|
|---|
| |