Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hoch_2382 |
Symbol | |
ID | 8544768 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haliangium ochraceum DSM 14365 |
Kingdom | Bacteria |
Replicon accession | NC_013440 |
Strand | + |
Start bp | 3298112 |
End bp | 3299938 |
Gene Length | 1827 bp |
Protein Length | 608 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 646387081 |
Product | ribosomal protein S1 |
Protein accession | YP_003266812 |
Protein GI | 262195603 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0539] Ribosomal protein S1 |
TIGRFAM ID | [TIGR00717] ribosomal protein S1 |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.105209 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.526812 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTAGAAG CCGGCGGCCA AAAATATGAG GCGGAGGAGA GCTTTGCCGC GCTCTTCGAA GAGAGCCTGA ATCAAGAGGA AGTCAAAGAA GGCGACATCC TGCAGGGAAC CGTGATCAGC GTAGGCAAGG ACTACGCGAT CGTCGATATC GGATACAAAT CCGAGGGGCA GATCGCCATC GACGAGTTCC GGCAAGCGGA TGGAGGCATT CTCGTCACCC CCGGTGACGT CATCGACGTC CTCTTGGAGA GCCGTGAGAA CGAAGCGGGC ATGTGCGTCC TCTCCAAGGA GAAGGCCGAT CGGTTCAAGG TGTGGGATGA GATCTCGGCC GCGTGCGAAC GCGACGAGCT CATCGAAGGA ACCATCACGC AACGGGTCAA GGGCGGTCTC AGCGTCACCA TTCGCGGTGG CGTGAAAGCC TTCCTTCCCG GCTCGCAAGT AGATCTTCGT CCGGTGCGCA ACCTCGACGC GTTCATCGGG CAGAGCTACA AGTTCAAGGT CATCAAGTTC AACAAGAAGC GTGGCAACAT CGTGTTGTCG CGGCGCGTGC TGCTCGAGAA GGAGCGCGCG GCCCTCAAAG AATCCACCCT GGAACGCCTC AAAGAGGGCC AGGAGGTAGA GGGTATCGTC AAGAACTTGA CCGAGTACGG TGCTTTCATC GATCTGGGCG GCATCGACGG CCTGTTGCAC ATCACCGACA TGAGCTGGGG CCGGGTCAAT CACCCGTCCG AGCTGTTCCA GGTCGGCGAC CACGTGCGCG TCAAGGTGCT CAAGTTCAAC GCGGACACCG AGCGAGTCTC TCTGGGTCTC AAGCAGATCA GCGAGGACCC CTGGAGCAAA GCCCAGGAGA AGTACATCCC GGGCACTGTC GTGCGCGGCA AGGTCGTCTC GCTCAAGGAC TACGGTGCCT TCATCGAGCT CGAAGAGGGC ATCGAAGGCC TGGTGCACAT CTCGGAGATG TCGTGGACCC GTCGGGTCAA GCATCCCTCC AAGATGGTCG CGGTCGGCGA CGTGGTCGAC GCGGTGGTCC TCGACGTGGA CGTCAAGAAC AACCGCATCT CGCTGGGTAT GAAGCAGCTC GAGCCCAACC CGTACGAGCA GCTCAACGAG AAGTACCCGC CGGGCACCGT GGTCAAGGGC AAGGTCCGCA ACATCGCCGA CTTCGGTATC TTCGTGGAGA TCGAAGAGGG CATCGACGGC CTGGTTCACG TCAGCGACAT GAGCTGGACC CAGCGGGTCA AGCACCCGTC GGAGATGTTC CAGAAGGGCG ACGAGGTCGA GGCCGTGCTG CTCAACATCG ATACCGCCGA CGGCGAGAAG CCCAAAATCT CGCTGGGTAT CAAGCAGCTC AACACCGACC CCTGGGATCG CATCCCCTTC GACTTCCCGC CCGGGAAGAT CGTCGATGCC AAGGTGCTCA AGGTTCTCGA CTTCGGCGCG TTCGTCGAGA TCGAGAAGGG CATCGAGGGC CTGGTGCATG TCTCCGAGAT CTCGGACGAG CACGTCGATG ACCCGCGCAA GGTTCTCACC CCGGGCCAGG AGCTCAAGGT GCAGATCCTC AGCGTGGACC CGCAGGAGCG CAAGATCGGT CTCAGCGTGA AGTCCGCCAA TCGGGCTACG GAGATGGCCG AGGCGCAGGG TTACAACTCG CCGACGGCGG GTACCGCGAC CCTGGGTGAC GTGATGCGGG CGCAGCTCGC CGGTGCCTTC GGCAACGTCG CCACCAGCGA GAGCAGCGCC AGCGACGCCG ACGCCGACGC CGCTAGCGAC GCCGACAGCG ACAGCGACGC GGACAGCGAC AGCGACAGCG ACAGCGACGG CGAGTGA
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Protein sequence | MVEAGGQKYE AEESFAALFE ESLNQEEVKE GDILQGTVIS VGKDYAIVDI GYKSEGQIAI DEFRQADGGI LVTPGDVIDV LLESRENEAG MCVLSKEKAD RFKVWDEISA ACERDELIEG TITQRVKGGL SVTIRGGVKA FLPGSQVDLR PVRNLDAFIG QSYKFKVIKF NKKRGNIVLS RRVLLEKERA ALKESTLERL KEGQEVEGIV KNLTEYGAFI DLGGIDGLLH ITDMSWGRVN HPSELFQVGD HVRVKVLKFN ADTERVSLGL KQISEDPWSK AQEKYIPGTV VRGKVVSLKD YGAFIELEEG IEGLVHISEM SWTRRVKHPS KMVAVGDVVD AVVLDVDVKN NRISLGMKQL EPNPYEQLNE KYPPGTVVKG KVRNIADFGI FVEIEEGIDG LVHVSDMSWT QRVKHPSEMF QKGDEVEAVL LNIDTADGEK PKISLGIKQL NTDPWDRIPF DFPPGKIVDA KVLKVLDFGA FVEIEKGIEG LVHVSEISDE HVDDPRKVLT PGQELKVQIL SVDPQERKIG LSVKSANRAT EMAEAQGYNS PTAGTATLGD VMRAQLAGAF GNVATSESSA SDADADAASD ADSDSDADSD SDSDSDGE
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