Gene Hoch_2305 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_2305 
Symbol 
ID8544691 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp3208107 
End bp3208625 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content72% 
IMG OID646387010 
Productprotein of unknown function UPF0054 
Protein accessionYP_003266741 
Protein GI262195532 
COG category[R] General function prediction only 
COG ID[COG0319] Predicted metal-dependent hydrolase 
TIGRFAM ID[TIGR00043] metalloprotein, YbeY/UPF0054 family 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.154863 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCTCAT TGATGGTGGA TCGCGCGGTG GCGGCGCAGG TGCCCGTGCC GCAGCGCCGG 
CGCATGCGTC GTCGCATCGA GCGCATGCTG CGCGCGGCCG CGCTCAGCGA GGAGCCGCCG
CGGCCGCTCG AGGTGTCGCT GCGGCTCACG GACGACGACG AGATTCGCGC GCTTAACCGC
GACTATCGCG GCAAGGACAC GCCCACGGAC GTGCTCGCCT TCGCCATGCG CGAGGGCCCA
CAGGAGGGCA TGCCGCCGCT GGCCGCGGGC GAGGCCGAGT ATCTCGGCGA CCTGATCATC
TCGGTGCCCA CGGCGGCGCA GCAGCTCGCG CGCAAGCGTC CCATGGACGT GCCCGAGCGC
GAGCCGCTGC TGGCCGAGCT GCTATTTCTG AGCGCGCACG GCCTGTGTCA TCTGCTCGGC
TACGACCACC AGGACGACGC CGAGGAAGCC GAGATGAACG CGCGCATGGC CGAGCTGCTG
GCCGAGTGCG CGCGCACCGG CAGCACGCGC GCAGCCTGA
 
Protein sequence
MLSLMVDRAV AAQVPVPQRR RMRRRIERML RAAALSEEPP RPLEVSLRLT DDDEIRALNR 
DYRGKDTPTD VLAFAMREGP QEGMPPLAAG EAEYLGDLII SVPTAAQQLA RKRPMDVPER
EPLLAELLFL SAHGLCHLLG YDHQDDAEEA EMNARMAELL AECARTGSTR AA