Gene Hoch_2075 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_2075 
Symbol 
ID8544457 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp2867309 
End bp2869027 
Gene Length1719 bp 
Protein Length572 aa 
Translation table11 
GC content69% 
IMG OID646386778 
Productresponse regulator receiver sensor hybrid histidine kinase 
Protein accessionYP_003266513 
Protein GI262195304 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCTCCG ATGTCGATAG CCCGGTAGGG GACATCCTCG TCGTCGACGA CAACCAGAGC 
AACATCGCCG CCGTCGAGGT GGCGCTCGAA GATCTGGCCA CGCGTCTGGT AAAAGCCTGC
TCGGGCGAGG AGGCGCTGCG CCACCTGCTC CACGAGGATT TCGCCGTCAT CTTGCTCGAT
GTGCAGATGC CGTCGATGGA CGGGTTCGAG ACCGCGCGTC TCATCCGCGC GCGCAAGCGC
ACCAAGCACG TCCCCATCAT CTTCGTCACC GCCTTCGACC AGCAGGACGA AGACGTGCTC
GAGGGCTACA GCCTGGGCGC GGTCGACTTC CTGTTCAAGC CCATCGTGCC CGAGGTGCTG
CGCGCCAAGG TGGCCGTGTT CGTCGAGCTC AAGCGCCGCC GCGACGAGAT CGCGCGCCAG
GCCGAGCTGC TGCGCGAGCA CGAGCGGCTC GAGCACCAGC GCAGCCTCGA GGAGGTGCGC
CAGCGCTGGG AGGCCGACAT GCTGCGCCGG CAGATGGAGC AGCAGAAGCG CGCGGCCACG
CAGATCGCGG CGGTCAACGA GCAGCTCAAG ATCGCCGGCA AGCGCAAGGA CGAGTTCATC
GCCATGCTGG CGCACGAGCT GCGCAATCCG CTGGCGCCGA TCGTCATCGG CATCGAGCTG
ATGGAGAGCC AGAACCTCAC CGACCCGCTT CTGGTGCGCA TTCAGGAGAC CATGAAGCGC
CAGGTCGAGC ACCTCACCCG GCTGGTGGAT GATCTGCTCG ACGTCTCGCG CATCACCTCG
GGCAAGATCG AGCTGCGCCG CGAGATGACG CCGCTGGCGC CGATCGTCGA GCAGGCCACG
GACGCGGCGC GGCCGGCGCT CGAGGCGCAG GCGCACCGCC TGTTCGTGGA GATGCCGAGC
GAGCCGATCG AGCTCTACGT CGACGCCGCG CGCATCATCC AGGTGGTGGC CAATCTGCTC
AACAACGCCG TGCGCTACAC CGAGCCCGGC GGCGAGATCC GTTTGCGCTG CGCGCGCGAG
GACGACGATG TGGTCAGCAT CTCGGTGATC GACAATGGCC AGGGCATCGA GCCCGAGTTC
ATCGAGCGCA TCTTCGACAT GTTCGTGCAG AAGCGCCAGG GCGGGCCCGG TCTCGGGCTG
GGGCTCACGC TGGTGCGCCG CCTGATCGAG ATGCACGGCG GCACCGTGGC GGTGAGAAGC
GAGGGCGCCG GCACCGGCAG CACCTTCGAG GTGCGCCTGC CGATCGGGGC CGAGGAGGCC
GCGCGCGCCG CCGAGGCCGA GGCCGGTGCG AACGCGGGCG AGCCCGAGCG CGCGGGCGGC
GCAGATGGCG CAAACGGTGC GGATACGGCG GAGGCGCCGC CGGCGCTGCG CATCGTGGTG
ATCGACGACA GCGAGGACAT CCGCGACATG GCCAGCGCCA TCCTGGCCTA CCAGGGCCAC
GAGGTGCGCT CGGCCGGCAG CGGCAGCGAG GGGCTCGAGC TGGTGCTGGG CGATCCGCCC
GACGTGGTGT TCATCGATAT CGGCATGCCG GGCATGGACG GCTACGAGGT CGCCCGGCAG
GTGCGCGCGC GCGCGCCCGG CGGCGGCCCG CGTCTGGTGG CCATGACCGG TTTCGGCCAG
GCCCAGGATC GCAAGCGCGC CTTCGAGGCC GGCTTCAACG CTCACCTCGT CAAACCGACG
ACGCAAGAGC GGCTGCTGCG CGTGCTCACG GAAGAATGA
 
Protein sequence
MASDVDSPVG DILVVDDNQS NIAAVEVALE DLATRLVKAC SGEEALRHLL HEDFAVILLD 
VQMPSMDGFE TARLIRARKR TKHVPIIFVT AFDQQDEDVL EGYSLGAVDF LFKPIVPEVL
RAKVAVFVEL KRRRDEIARQ AELLREHERL EHQRSLEEVR QRWEADMLRR QMEQQKRAAT
QIAAVNEQLK IAGKRKDEFI AMLAHELRNP LAPIVIGIEL MESQNLTDPL LVRIQETMKR
QVEHLTRLVD DLLDVSRITS GKIELRREMT PLAPIVEQAT DAARPALEAQ AHRLFVEMPS
EPIELYVDAA RIIQVVANLL NNAVRYTEPG GEIRLRCARE DDDVVSISVI DNGQGIEPEF
IERIFDMFVQ KRQGGPGLGL GLTLVRRLIE MHGGTVAVRS EGAGTGSTFE VRLPIGAEEA
ARAAEAEAGA NAGEPERAGG ADGANGADTA EAPPALRIVV IDDSEDIRDM ASAILAYQGH
EVRSAGSGSE GLELVLGDPP DVVFIDIGMP GMDGYEVARQ VRARAPGGGP RLVAMTGFGQ
AQDRKRAFEA GFNAHLVKPT TQERLLRVLT EE