| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_2036 |
|---|
| Symbol | |
|---|
| ID | 8544418 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haliangium ochraceum DSM 14365 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013440 |
|---|
| Strand | + |
|---|
| Start bp | 2809782 |
|---|
| End bp | 2812196 |
|---|
| Gene Length | 2415 bp |
|---|
| Protein Length | 804 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 646386739 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003266474 |
|---|
| Protein GI | 262195265 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.362684 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAACA GCGGTTCTTT TCAACGAGGT CCGGGGGCGT CCGCGGACGC GGAGCGGGGC
GCGCGGCAGC AGCAGGGCTC ACGGCCGACG CCGGGCAAGG TCACGCGCAC CAGCAAGCTC
AGGCCGGTGC AGGCCAAGCG CGGCGGCGCG GACGGTGGCG CGGCGGCGGC AGGCGCGGGC
GGCGGCGGCG CGGCGGGCGG CGGAGGCGGG TTGCCCGGCG GCCTCAAGAC CGGGATCGAG
TCGCTCTCGG GGGTGTCGAT GGACGGGGTC AAGGTGCACT ACAACTCGCC GCGTCCGGCG
CACGTGGGCG CGCTGGCCTA CGCCCAGGGC AGCGACATCC ACGTCGGCCC CGGGCAGGAG
CAGCATCTGC CGCACGAGGC CTGGCACGTG GTGCAGCAGG CGCAGGGGCG GGTGGCGAGC
ACCACGCAGA TGAAGGGCGT GGAGCTCAAC GACGACGCCG GGCTCGAGCG CGAGGCCGAC
GTCATGGGCG CCAAGGCGCT CGCGATGGGC GGCTCGGAGG CGGCCGCGAC CTCGGCCGGC
CCGGCGGCGA GCGGTCCGGT GCAGGCCGTC CGAAATCCCG ACTTCGGCGG CGTGGTGGTG
CAGCGCTTCG GCTCGCTCGA GCACAAGACC CTGGGCGATC GCCCCACCGG CAGCGCCGAA
TACGACATGG GCGGACACAC GGCCGAGAGC GACGCCGACG CGTACAACGC GGCCTTCCGG
CTCACCCACG GCGACATCAT CATGCTCTCG GGTGACTTCT TCTCGCCGCG CGACACGCGC
ATGAACGAGC AGGGCGTCGA GGAGCCCGAC CCCGACTCGC TGTTCCGCAT CGCGGGCACG
CCCTCGCGCT CGCCGGGGCA GACCGTGGGC TCGTGGGATG AGGTGGTGTA CGCCATCAAG
AAGGCCATGC CCAACGACGA TCGCTTTCAG CCGGCCTCGC TGCCGGGCTT TCCCGATGGT
CACCCGTGGG CGAGCGTGCG CTTCTCGGCC GACGTGATGG CCGCGGTCGA CGCGCGCTAT
CTGCGCCGCG CGGCCAGCAA CGACGAGCAC TTCGTGGCGC CCACCGGCAC GGATCGCGGA
CCCACGGCCG GCGACCGCGC CTCGGCCGGC GGCTCGTATC GCGCGCTGCA CGAGGTGGCC
ATCCAGATGG CCTACGACGA GGGCACTGCC GCCACCGCGA TGGCCCGCGA GGCAGCGGCC
CAGCACTTCC TCACCGATCA CTTCGCGTCC GGCCACCTGC GCACGCCGCG GACCTCGATC
CGGGCCCACT GGCAGGCGAT CTACCCGCTG TTCTGGGACA ATATCCGCAA CAAGATCGCG
CTCGATGTCG CCACCTGGAT CAACGACAAC GAGAACCTGG GCTATCTGGC CTCGGTGGAC
CAGATCTACA CCGACATCCA GACCCAGGTG GTGGAGGCGA CCGCCGATAT TCCGCCCATG
GGCTTCGACG ACCTGGTGTC TCTGGTGACC CACGACTTCG ACAACGAGAA CGGGCTGTGG
GTGACAAACG ACCTCGGTGA GTCGTGGAAG CTGTTCGGCG ACGGCAACCT CGACAGCGCC
GACCCCGACA ACCGCACCCG CGAGATGAGC GAGCTGGCCG TGAGCCTGGG CAACGCCGAC
ATCGAGGCGG CCGCGCAGAT GGGCGCGAAC AAGGGCGATA CTCCGCTCAG CGCCGCGGAG
CTGTTCGACT CGGTGCGCAG CATCACGGGC GCGCCGGCCT CGGCCGGGGT CAAGTACGGC
CCCGAGCAGG TGCTGCCGCG CCTCGACAGC GCCCGCGCGT CCGAAAACGG CAGCTCGAAC
TGGCAGCAGT CGAGCATGGA CGAGCTGTGG CAGGCGCAGG TGACCAGCGC CACCGCGGCC
ACCTACGGCT CGGAGATCAC GGCCAGCATG CAGGGCGGCG AGCTGCAGCA CGAGCTGGCC
GGCATGGCCG AGAAGTTCCC CGAGTCGCAG GACGTGATGG GCGTGTTCAC GGTGCGCCCG
CGCCAGGCCT TCCTCGACGG CTTTCTCGGA CCGCTGGTCG CCAACCCGCG CACCGGTCTG
CAGAGCATCC TCGATTTCTC GCCCTCGCGC GGCCAGGCCG GCTTCAACGA GGACGACGCG
GTCATGCGCG AGATCGAGGG CGAGGACGGC GCGGGCGGCA TGAGCGACGA GCAGCTCGGG
GGCCTGACCA TGAACCAGCG CGCCGAGCGC ATCCGCGCGC TCATCGGCGG CTGGACGGGC
GAGGACGAGG GCGAGGTGGT GATCCGCATC TTCGAGACCA CGCCCGCGGG CGATCGCGCC
CGGCTCTACG AGATGGTCGA GGGCCACCCG TGGACGGGCA ACTGGCGCGA GGGCTTCTTC
GTGGTCGACG ACGACATCTG GGACGCGCTG TACGAGTCGC AGCTCGAGCG GCTGCGCGAT
ATCATCGGCC ACTGA
|
|---|
| Protein sequence | MSNSGSFQRG PGASADAERG ARQQQGSRPT PGKVTRTSKL RPVQAKRGGA DGGAAAAGAG
GGGAAGGGGG LPGGLKTGIE SLSGVSMDGV KVHYNSPRPA HVGALAYAQG SDIHVGPGQE
QHLPHEAWHV VQQAQGRVAS TTQMKGVELN DDAGLEREAD VMGAKALAMG GSEAAATSAG
PAASGPVQAV RNPDFGGVVV QRFGSLEHKT LGDRPTGSAE YDMGGHTAES DADAYNAAFR
LTHGDIIMLS GDFFSPRDTR MNEQGVEEPD PDSLFRIAGT PSRSPGQTVG SWDEVVYAIK
KAMPNDDRFQ PASLPGFPDG HPWASVRFSA DVMAAVDARY LRRAASNDEH FVAPTGTDRG
PTAGDRASAG GSYRALHEVA IQMAYDEGTA ATAMAREAAA QHFLTDHFAS GHLRTPRTSI
RAHWQAIYPL FWDNIRNKIA LDVATWINDN ENLGYLASVD QIYTDIQTQV VEATADIPPM
GFDDLVSLVT HDFDNENGLW VTNDLGESWK LFGDGNLDSA DPDNRTREMS ELAVSLGNAD
IEAAAQMGAN KGDTPLSAAE LFDSVRSITG APASAGVKYG PEQVLPRLDS ARASENGSSN
WQQSSMDELW QAQVTSATAA TYGSEITASM QGGELQHELA GMAEKFPESQ DVMGVFTVRP
RQAFLDGFLG PLVANPRTGL QSILDFSPSR GQAGFNEDDA VMREIEGEDG AGGMSDEQLG
GLTMNQRAER IRALIGGWTG EDEGEVVIRI FETTPAGDRA RLYEMVEGHP WTGNWREGFF
VVDDDIWDAL YESQLERLRD IIGH
|
|---|
| |