| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_1967 |
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| Symbol | |
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| ID | 8544349 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | - |
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| Start bp | 2715289 |
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| End bp | 2716128 |
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| Gene Length | 840 bp |
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| Protein Length | 279 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 646386671 |
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| Product | MscS Mechanosensitive ion channel |
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| Protein accession | YP_003266406 |
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| Protein GI | 262195197 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0668] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.340778 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAACAGA TTCCCGAGCT GTTTTCGCAA GAATGGTTTA CACGCATGCT GCATGTATAC
GTGATCCCAT TCTGTATCAA TTTGGTCTTC GCGCTCCTGG TCTTTCTGCT GGGACGCATC
GTGGCACGCG CGCTCACCGG CCTGGTGCGG CGCGTTCTCG AACGCGGCGG GGTCGATACC
ACCCTGGTAC GCTTCGTGTG CAGCGTGCTC TACGTGCTGC TGCTGGCGGT GGTGGCCATC
GCCTCGCTCG ATCAGCTCGG GGTGGAGACG ACCTCGGCGA TCGCGGTGCT GGGTGCTGCT
GGCCTGGCTG TCGGTCTGGC GCTGCAGGGC TCGCTGGGCA ATCTGGCGGC CGGTGTGATG
ATCATCGTGT TTCGCCCCTA CCGCGTCGGC GACGTGGTCA ATCTCGCCGG CACCATCGGC
TCGGTGACCG AGATCGCCAT CTTCAACACC ATCCTCACCA CCGGCGACAA CCGCGAGATC
ATCCTGCCCA ACGGCACCAT CACCAGCAGC AAGATCGAAA ACATCACCAA GCACGACACC
CGCCGCGTCG ATATGACCTT TGGCATCGGC TACGACGATG ACATCCGCAA GGCCAAGGAG
ATCCTCGAGC GCCTGGTGTC CGAGGACGAA CGCGTGCTGC CCGAGCCGGC TCCGACCATC
GTGGTCGGCG AGCTGGCCGA CTCGAGCATC AACATCCTGT GCCGCCCGTG GGTCAAATCC
AGCGACTACT GGGGCCTGTA CTGGGACTTC ATGGAGAAGG TCAAAGTGGC CTTCGACGAG
GCCGGCATCA GCATCCCGTT CCCGCAGCGC GACGTGCACG TGCACCAGAG CGCGGCCTGA
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| Protein sequence | MQQIPELFSQ EWFTRMLHVY VIPFCINLVF ALLVFLLGRI VARALTGLVR RVLERGGVDT
TLVRFVCSVL YVLLLAVVAI ASLDQLGVET TSAIAVLGAA GLAVGLALQG SLGNLAAGVM
IIVFRPYRVG DVVNLAGTIG SVTEIAIFNT ILTTGDNREI ILPNGTITSS KIENITKHDT
RRVDMTFGIG YDDDIRKAKE ILERLVSEDE RVLPEPAPTI VVGELADSSI NILCRPWVKS
SDYWGLYWDF MEKVKVAFDE AGISIPFPQR DVHVHQSAA
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