Gene Hoch_1940 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_1940 
Symbol 
ID8544322 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp2669769 
End bp2670071 
Gene Length303 bp 
Protein Length100 aa 
Translation table11 
GC content63% 
IMG OID646386644 
Productputative transcriptional regulator, ArsR family 
Protein accessionYP_003266379 
Protein GI262195170 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.146779 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0107973 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATCTGG ATGCGGTGTT GCGCGCGCTC GCCGACGGCA CCCGCCGGGT GATCATCGAC 
GAGCTCGCCG AGCGGGAAGA ACAGAGTTTG TTCGAGATCT GTGTGCGACT CACCGAAAAA
CACGGAATCG CGATATCGCG CCAGGCGGTG TCCAAACACC TCGGGATTCT CGAGGCGGCG
GGCTTGATCG CGGTCGAGTG GCGGGGTCGG ACCAAGTTGC ATTCGCTCGA GCCGGCGCCG
CTGCGCGCGC TCGGGCGGGG CTGGTTAGCC AATTACGTGT TCGAGAAAGA GAGCGACAAA
TGA
 
Protein sequence
MDLDAVLRAL ADGTRRVIID ELAEREEQSL FEICVRLTEK HGIAISRQAV SKHLGILEAA 
GLIAVEWRGR TKLHSLEPAP LRALGRGWLA NYVFEKESDK