Gene Hoch_1901 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_1901 
Symbol 
ID8544283 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp2610397 
End bp2611542 
Gene Length1146 bp 
Protein Length381 aa 
Translation table11 
GC content69% 
IMG OID646386606 
Productadenylate/guanylate cyclase 
Protein accessionYP_003266341 
Protein GI262195132 
COG category[T] Signal transduction mechanisms 
COG ID[COG2114] Adenylate cyclase, family 3 (some proteins contain HAMP domain) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.500403 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACGGCA CCTCTGCACG CGAGCGCGAA CCGGACGCCC CTGGGCGGGT GATCCTGGTC 
GACGATTCGC CCGTGGTGCG CGACGTGGTC AGCGAGCGCC TGGCGGACAG CGGCTGGATC
GTGCGCGTGG CCAGCGGCGG CGCCGAGGCG CTCGAGCTGG TGCGCGATTG GCAGGCCGAC
GTGGTGGTCT GCGATCTCCA CATGCCCGAC ATTCCCGGCC TCGACGTCAT CGGCCAGATC
CTGCAGATCG ACCGCACCCT GCCGGTGGTG GTGCTCAGCG GCGACGACGA CCTCGGCGCG
GTGCTGCGAG CCGTGCGCGG GGGCGCCTTC GACTACGTGC TCAAGCACGA CCGCGACCTG
CAGTCGCTCG ATACCGCGGT CGAGCGGGCG GTGGCTCACG CGCGCCTGGT GCGCGAGAAC
CAGCGGCTCA CCCACGCGCT CGAGGAGGCC AACCGCGAGC TCGGACGCCA CATTCGCGAG
CTGCGCGCGC AACACGGATT GGTGGCGCGC GCCCAGGCGC GCTCGGCTTC GCTGCTGCGC
AACATCCTCC CCGAAGCCAT CGCCGAGCGC CTGATGGACG AGGGCGAGAC CGTGGCCGAC
GGCTTCGACG CGGTCACGGT GATGTTCGCC GACGTGGTCG GGTTCACGCG GCTGGCCGCG
CTGCGTCCGC CGATCGAGAT CGTCGAGCTA CTGCACAACA TCGTGTCGCG CTTCGATGTG
CTCAGCGAGC GTTACGAGGT CGAGAAAATC AAGACCATCG GCGACGCGTA CATGGTCGCG
GCCGGCCTGC CACGTCCCCG GGCGGATCAC GCCGAGGCGG TCGCCGAGAT GGCGCTCGAG
ATGTTGGAGG TGGTCGCGGC CGTGAGCGAG CAGACCTCGA CGCCGCTGTC GATCCGTATC
GGCATGCATA CCGGACCCGT GGTCGCCGGC GTCATCGGTA CCAAGAAGTT CAGCTACGAC
GTCTGGGGCG ACACGGTCAA CGTGGCCAGC CGCATGGAGG CGAGCAGCGT GCCCGGCCGC
ATTCAGCTCA CGGACGAGAC CCGTCACCTG CTCATGGAGC GCTACGAGTT CGAAGAGCGC
GGCCCCATCG CGGTCAAGGG CAAGGGCCTG GTGCGCACCT GGTTTTTGCG CGGTCGCCTG
GCCTGA
 
Protein sequence
MHGTSARERE PDAPGRVILV DDSPVVRDVV SERLADSGWI VRVASGGAEA LELVRDWQAD 
VVVCDLHMPD IPGLDVIGQI LQIDRTLPVV VLSGDDDLGA VLRAVRGGAF DYVLKHDRDL
QSLDTAVERA VAHARLVREN QRLTHALEEA NRELGRHIRE LRAQHGLVAR AQARSASLLR
NILPEAIAER LMDEGETVAD GFDAVTVMFA DVVGFTRLAA LRPPIEIVEL LHNIVSRFDV
LSERYEVEKI KTIGDAYMVA AGLPRPRADH AEAVAEMALE MLEVVAAVSE QTSTPLSIRI
GMHTGPVVAG VIGTKKFSYD VWGDTVNVAS RMEASSVPGR IQLTDETRHL LMERYEFEER
GPIAVKGKGL VRTWFLRGRL A