| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_1887 |
|---|
| Symbol | |
|---|
| ID | 8544269 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haliangium ochraceum DSM 14365 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013440 |
|---|
| Strand | + |
|---|
| Start bp | 2596745 |
|---|
| End bp | 2597635 |
|---|
| Gene Length | 891 bp |
|---|
| Protein Length | 296 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 646386592 |
|---|
| Product | ABC transporter related protein |
|---|
| Protein accession | YP_003266327 |
|---|
| Protein GI | 262195118 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG1127] ABC-type transport system involved in resistance to organic solvents, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCAGCG CCCAGTCTTC AGATCTCGAG GGACGCCACG AGCCCCTCAT CGCTACGGAC
GACGGAACCC CGCTCGAACA GGCGCACCCG ACCTGGCAAA TCCGGGTCCG GGATCTGCGC
AAGCGCTTCG GCACCAACCA GGTGCTCGAC GGCGTCGATG TCGATCTCGA GCGCGGCAAG
GTCAACGTCA TCATCGGCGG CTCGGGCGCG GGTAAGTCGG TGCTGGTCAA GCACTTCATG
TGTCTGCTGC GCCCGGATAC CGGCGGCGTG TGGGTCGATG GCACCAACAT CTTCGCGCTC
AGCACCAAGG AGCTGGCCCA GTTCCGGCGC AAGTTCGGCA TGGTGTTCCA GTTCGCGGCG
CTGTTCGATT CGCTCTCGGT TGAGGACAAC TGCGCCTTCC CGCTGCGCGA GCACACCGAC
AAGGGCAAGG ACGAGATCCG CGAGATCGTG CGCGACCGGC TGGCCGCGCT CGGGCTCGAC
GGCACCCAGA AGAAGTTTCC GGGCGAGCTC TCGGGCGGTA TGCGCAAGCG CGTGGGTCTG
GCCCGGGCGC TGGTGCTGTC GCCCGAGATC CTGATCTACG ATGAGCCCAC GACCGGTCTC
GATCCGCTCG CGACCAAGAA CGTGGACGAC ATGATTCTCA CAACCAGCGA GCGCTTCAAC
GTCACTTCGG TGGTGATCTC GCACGACATG GCCTCGGTGT TCCGCATCGC CGAGCGCATC
GCCATGCTGC ACGAGCGCCG CATTCGCTTC GCCGGAACCG TCGATGAGGT GCGCGACACC
GACGACGAGT TCGTGCGGCG GTTCATCACT ACCTCGGGTG TGTCCGCGAC CATGCAGGAC
GACGTCGATG ACGATCGCCT CCGGGCCGCG GGCGGAGGAG ATTCGCAGTG A
|
|---|
| Protein sequence | MSSAQSSDLE GRHEPLIATD DGTPLEQAHP TWQIRVRDLR KRFGTNQVLD GVDVDLERGK
VNVIIGGSGA GKSVLVKHFM CLLRPDTGGV WVDGTNIFAL STKELAQFRR KFGMVFQFAA
LFDSLSVEDN CAFPLREHTD KGKDEIREIV RDRLAALGLD GTQKKFPGEL SGGMRKRVGL
ARALVLSPEI LIYDEPTTGL DPLATKNVDD MILTTSERFN VTSVVISHDM ASVFRIAERI
AMLHERRIRF AGTVDEVRDT DDEFVRRFIT TSGVSATMQD DVDDDRLRAA GGGDSQ
|
|---|
| |