| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_1825 |
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| Symbol | |
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| ID | 8544207 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | - |
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| Start bp | 2516798 |
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| End bp | 2518045 |
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| Gene Length | 1248 bp |
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| Protein Length | 415 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 646386531 |
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| Product | HipA N-terminal domain protein |
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| Protein accession | YP_003266266 |
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| Protein GI | 262195057 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3550] Uncharacterized protein related to capsule biosynthesis enzymes |
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| TIGRFAM ID | [TIGR03071] HipA N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.401045 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.66095 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAACGTG CCAGCGAAGC ATCTCGGCGG GGCCTGGACG TCCGGGTCTC AAACGTCCGG
GTGGGCTCCC TGGCTCGAGA CGCAGGCGGC GACCTGCGCT TTACCGCCGA CCGCGCATGG
CTCGAAGACG GGCAGCACCC GCCTCTGGGT CTGACGTTCT TGCAAGACCC TGCGCCGCGC
GTGCAACGCG GCCTCGTGCC CGTATGGTTT GAAAACCTCC TGCCCGAGCG CGGGACTCCG
ATGCATCGCT GGATCTGCCA ACAACACGGA CTCCGCGAGC GCGACGAAGC AGCCCTGCTG
CAGGTACTCG GTCATGATCT GCCAGGCGCC GTAGAAGTCA GCGGCGACAT CGACGAGCGC
GAAGACGAAG CCACCGAAGC GCCAGAAGAT GGCCGATTTC GTTTCTCGCT GGCGGGCATG
CAGCTCAAGT TCTCCATGCT ACTCGAAGGG GATCGCCTGT CGCTGCCGCT CCGCGGAGAG
ACCGGACACT GGATCGTAAA GGTTCCCGGA AACGAGCTTC CTCAGGTCCC CGAAGTCGAG
GCAGCAACCC TCACCTGGGC GGAGGCAGCA GGCTTCGCCA CGCCTCGCCA TCGAGTGATG
CCCCTCAAAG CGCTCGCCGG TATCGACGCC GCGCGCCTGG GTCAAGCGCA CTGCGTACTC
GCCGTCGAGC GCTTCGACCG TCGCGCCGAC ACGCGAGTTC ACCAGGAGGA TTTCGCCCAG
GCGCTCGAGA TCCGTCCCTC CGACAAGTAC GGGGCCCGCA ATCGCGCCCC GACCTATGAC
AGCCTCGCCC GCCTGGTACG GGACGCATGT GGCATCGAGG GGCAGAAAGA GTTCATCCGA
CGCGTGGCCT TCGTTGTCGC GTCGGGCAAC AGCGACGCTC ATCTCAAGAA CTGGTCGTTT
CAATGGGGCG CGTCCCACCG CCCCCGGCTC AGCCCTTGTT ACGACCAGGT GGCCACCATC
TCGTGGCCAG AATTTGGCTG GAACGCGGCC GGGGGCGCGG AGTTAGCGCT CACCCTGGGA
CGCTCCAAAC GCTTCGGCGA ACTCGACCGC AGCCGACTGC GCCTGTTCGC AGAGCGCGCC
GGTGCTCCCG ATGGAGAGGC GTGGTTCCTC GATGCGCTCG ATCAAATTCG CAGCGCGTGG
TCGGGACTCG AAGCGCAGGC GCCCGCGCGC ATGCGTGACG CGCTGCTCGA ACACTGGCAA
AAAGTGCCCG TCCTTTGGGA CATGGGCGGT CTCCCCGGTG CGAGATGA
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| Protein sequence | MKRASEASRR GLDVRVSNVR VGSLARDAGG DLRFTADRAW LEDGQHPPLG LTFLQDPAPR
VQRGLVPVWF ENLLPERGTP MHRWICQQHG LRERDEAALL QVLGHDLPGA VEVSGDIDER
EDEATEAPED GRFRFSLAGM QLKFSMLLEG DRLSLPLRGE TGHWIVKVPG NELPQVPEVE
AATLTWAEAA GFATPRHRVM PLKALAGIDA ARLGQAHCVL AVERFDRRAD TRVHQEDFAQ
ALEIRPSDKY GARNRAPTYD SLARLVRDAC GIEGQKEFIR RVAFVVASGN SDAHLKNWSF
QWGASHRPRL SPCYDQVATI SWPEFGWNAA GGAELALTLG RSKRFGELDR SRLRLFAERA
GAPDGEAWFL DALDQIRSAW SGLEAQAPAR MRDALLEHWQ KVPVLWDMGG LPGAR
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