Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hoch_1316 |
Symbol | |
ID | 8543698 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haliangium ochraceum DSM 14365 |
Kingdom | Bacteria |
Replicon accession | NC_013440 |
Strand | - |
Start bp | 1742241 |
End bp | 1743416 |
Gene Length | 1176 bp |
Protein Length | 391 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 646386032 |
Product | CRISPR-associated protein, Cmr3 |
Protein accession | YP_003265767 |
Protein GI | 262194558 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1769] Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily) |
TIGRFAM ID | [TIGR01888] CRISPR-associated protein, Cmr3 family |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAACGC GCGCCTACCT GCTTCAGCCC ACCGACGTAT GGTTCTTTCG CGACGGCCGC CCGTATGACC GCTACGAGGC CAGTCAGACG GCGGTCAAGA GCCTGTTCCC GCCCTCTCCG CTAACCGTAC TTGGCGCCTT GCGTGCCGGC CTGGCGCGCG CCCTGGGTTG GCGTGACGGG CCCTGGCCAG CCGAAATCTG TGCCGTGCTC GGCGACGGTA TCGAAGACCT GGCCGAGCTC TCGCTGCGTG GCCCGTATCT GGCCCGGAGC GTCGACCCGG AGCGGCCCGA GCCGTGGTGG CCGCTTCCCG TACACCTGGT CGGAATTGTC CAGAACGGAG TGCGGCATGC TCAGGCTCTT GGGCATCGCG AAGACGAGCA AAGCCTACCG TGGCGAGCCC GCGCGCTGCT GAGACCCAGC CAGGAGCCGA TCCGCTGCGA CCTCGGCGAG GTGCACCTGC CCGTGCCGTC CAGTGACAAG CCGGCTCCGC CCTCCGAGCG CTTGTCCGCG CGGCCGCGGT ACTGGGTGAA CACCGCCGGC CTCGACGCCA TCCTCGCCGG CCGGTTGCCC AAACCCGAGG ACGTGATCGC GCCGCCCTGG CAGCACCAGA TGCGCGTGGG CATCCACCGG GACGAGACCA CGCGAACGAC CAGCGATCGC GCCCATGCCT TGTACAGCCC GCTCATGGTG AGCTTGCGGC CCGACTTCGG ACTTTTGGCC GAAATGCGCG GCGTACCCGA CACCGTGGAC GATCCCGCGC CGGTCTTGCC GCTGGGTGGC GAGTCCCGCC TGGCTGCTTG CCAGCGCGTG GCCTCTCCCC GTGCCCCGTC GTGTCCGAGC AATCTCATCC GCAAGAGCCG ACGCTGCGTT GTGGTCCACC TGTCCCCCGC CCGACTATCG AGCCTGCCGC GACCAGGCGA AACGCTCCCC GACCTGCCGG GCGCGCGGGT GGTAACGGCC TGCTTACGGC CGCTCGAGCA GATCGGCGGC TGGGATGGCC GGGACCGAGC GAAAGCACGC CCGCGACCGC TCAACCCCGT GGTGGCCGCG GGTAGCGTGT GGTTCTGCGA GCTCGATGGT GACGTCGACG CAACCCTGAA CATGCACGAT GGCCGCATCG GCGATGACAC GCGCTGCGGC TTTGGACACC TTGCCTTGGG CACCTGGCCC GCTTGA
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Protein sequence | MTTRAYLLQP TDVWFFRDGR PYDRYEASQT AVKSLFPPSP LTVLGALRAG LARALGWRDG PWPAEICAVL GDGIEDLAEL SLRGPYLARS VDPERPEPWW PLPVHLVGIV QNGVRHAQAL GHREDEQSLP WRARALLRPS QEPIRCDLGE VHLPVPSSDK PAPPSERLSA RPRYWVNTAG LDAILAGRLP KPEDVIAPPW QHQMRVGIHR DETTRTTSDR AHALYSPLMV SLRPDFGLLA EMRGVPDTVD DPAPVLPLGG ESRLAACQRV ASPRAPSCPS NLIRKSRRCV VVHLSPARLS SLPRPGETLP DLPGARVVTA CLRPLEQIGG WDGRDRAKAR PRPLNPVVAA GSVWFCELDG DVDATLNMHD GRIGDDTRCG FGHLALGTWP A
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