Gene Hoch_1254 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_1254 
Symbol 
ID8543636 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp1645335 
End bp1646168 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content70% 
IMG OID646385972 
Productdienelactone hydrolase 
Protein accessionYP_003265707 
Protein GI262194498 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0412] Dienelactone hydrolase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.546126 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGGCAG AAGCAGCGCA AGTACTCAAG CACTACGAAT CGTTCGAGTT TCGCCACGAT 
CGCTGGACGC GGCGCGTGTA CCGTCGCGGC ACCGGCCCGG CCGTGATCAT CATCCACGAG
ATGCCGGGCC TGCACCCGCT CGTCGTCCGC TTTGCCGACC GCGTGGCCGA CGCCGGCATG
AGCGTGTTCC TGCCCAAGCT GTTTGGCAAA CCCGGCAAGA CCGCGAGCCT CGGCTACGCC
ACCGCCGAGA TGCTCAAAGC CATATGCGTG CGGCGCGAGT TCTCGCTGTG GGCGAGCGAT
CGTTCCAGCC CCATCGTCGA CTGGCTGCGC GCGCTGGCTC GCAACGCACA CGAAGAGTGC
GGCGGCGCGG GCGTGGGCGC GCTGGGCATG TGCTTCACGG GCGGCTTCGC GCTGGCCATG
ATGACCGAGC CGGCCGTGGT CGCGCCCGTG CTCTCGCAGC CCTCTCTGCC GCTCCTGCCG
GGTCCGGGCG GGCGCCGCCG CGCGGCCGCC ATCGACGCCT CGCCCGCCGA GATCGCGTGC
GCCCGCCAGC GCCTGGAGAG CGAGGATCTC AAGCTGCTCG GGCTGCGCTT CCTGGGCGAC
CCCTTCGTGC CCGACGCCCG CTTCGACTTC CTCAAGACCA CCTTCGGGGA CCGCTTCGAG
GCCATCGAAC TCGACCCCGC CGGGGCCCCA CGCGGCATCA CCTCGACGCC GCACTCCGTG
CTCACCATCA ATCTCGACGA CAGTGACCCG GACAGCCCGA CCAAAAAAAC CGAGCGCCGC
GTGATCGAGT TCTTCTCCGA GCGCCTGTAC CGCGAGCGCG GCGACGACGC CTGA
 
Protein sequence
MSAEAAQVLK HYESFEFRHD RWTRRVYRRG TGPAVIIIHE MPGLHPLVVR FADRVADAGM 
SVFLPKLFGK PGKTASLGYA TAEMLKAICV RREFSLWASD RSSPIVDWLR ALARNAHEEC
GGAGVGALGM CFTGGFALAM MTEPAVVAPV LSQPSLPLLP GPGGRRRAAA IDASPAEIAC
ARQRLESEDL KLLGLRFLGD PFVPDARFDF LKTTFGDRFE AIELDPAGAP RGITSTPHSV
LTINLDDSDP DSPTKKTERR VIEFFSERLY RERGDDA