| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_0557 |
|---|
| Symbol | |
|---|
| ID | 8542937 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haliangium ochraceum DSM 14365 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013440 |
|---|
| Strand | - |
|---|
| Start bp | 750516 |
|---|
| End bp | 751928 |
|---|
| Gene Length | 1413 bp |
|---|
| Protein Length | 470 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 646385351 |
|---|
| Product | cobalamin synthesis protein P47K |
|---|
| Protein accession | YP_003265088 |
|---|
| Protein GI | 262193879 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0523] Putative GTPases (G3E family) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.17268 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCTCGGCC GGGTGGACCG GCTCGGCTCG GTCCTCGCGC TCGCCTTCGC GGCCGCGTGC
GTGGTGCTGG CCTTCTTCGA CGCGCCGCGG GTCGCCGCCG CGTTGCTCGC CATCGTCGCG
CCCGTGGCCG TGGCCTCTGC GTGGGCGGGA TGGCGCGTAC ACCGCCGCGG CTGGCCGGTG
GCGCTGTCGG CGCTCGGACT CGTGGTCGCC GGAGTCGGCG GCTGGCTCGG CGTCGGCGGC
GTGCTGGGCA CGATCCTCGC GGCCGTCGGC GGCCTGACCC TGGCGGCGGC CCACGACATC
CATTACTTGC TGCGCCGGCG CGCTCCGGTG CCGATCGTGG TCCTCACCGG CTTCCTCGGC
AGCGGCAAGA CCACGCTCCT CAATCAAGTA CTCGCGCGCG GCGGCGCGGC CGGGACGGTG
GTCATCGTCA ACGAGTTCGG CGAGGTCGGC CTCGATCACC TGCTGGTCGA GCACGTGGAC
GAACGCATGA TGTATCTCTC CAATGGATGC ATCTGCTGCA CGGTCCGCGG CGATCTGATC
AAGACCTTGC AGGAGGTCTT CACCCGGGCC GACCGCGGCG AGATGCCGCC TGTGCATCGC
GTGCTGGTCG AGACCACGGG GATGGCAGAG CCCGCGCCGA TCGTGCACGC GCTCATGCCT
CCGCCCCTGG TGACCCCGCG CTACCAGCTC GCCGCGGTGG TGACCACGGT CGACGCGGTC
AACGGGTTGC ACAGCTTGCA GCGCCATCCC GAGGTCGCGA TGCAGGTGGC CATGGCCGAT
CGCGTGTTCC TGACCAAAAC CGACCTGAAT GCCGATGTCG AAGAGCTGCG CGCGCGCCTG
CGCGAGGTCA ACCCCGGCGC CATGATCGTC GATGTGGTTC GCAACCCGAC CGGTATCGCC
GAGTTGCTGG GCGCCCGGAT GTACGAACTA CCCGAGCGGG CGCAGGCGGT CGATGCCTGG
CTCGGCGACG CGCGGCATCG CGCGCGCGAC CAGCACGCGC ATGGCGATGG CGACCACGAC
CACGACCACG GCGGCGACGA GCACCACCAC GATCACGAGA TCCGCTCGCA TTGCGTCACC
CGGGAACAGC CGCTGCGCCT GCGCTCGTTC CAGCGCTTCA TGGCGCTGCT CGCCGCCGAG
CAGGGCGACG ATCTGTTGCG CGTCAAAGGC ATTCTGCACC TGGCCGAGCG CCCGGGTACG
CCGGCGCTGG TCCACGGCGT CCAGCACGTG CTGCACCCGG TTCGCTGGCT CCCGCGCTGG
CCCGAGGACG ATCGCACCAG CCGCCTGGTG TTCATCACCC GGGGCATCCC GCGCGAGCGT
CTCGATCTGC TGCTCAGCGC ACTCGAACGG GCCGACGTCG TGGCCCCGGC CCCCGCGCTC
TCCGCGGAGG CCCCGCGCTC TCCCGACGCG TGA
|
|---|
| Protein sequence | MLGRVDRLGS VLALAFAAAC VVLAFFDAPR VAAALLAIVA PVAVASAWAG WRVHRRGWPV
ALSALGLVVA GVGGWLGVGG VLGTILAAVG GLTLAAAHDI HYLLRRRAPV PIVVLTGFLG
SGKTTLLNQV LARGGAAGTV VIVNEFGEVG LDHLLVEHVD ERMMYLSNGC ICCTVRGDLI
KTLQEVFTRA DRGEMPPVHR VLVETTGMAE PAPIVHALMP PPLVTPRYQL AAVVTTVDAV
NGLHSLQRHP EVAMQVAMAD RVFLTKTDLN ADVEELRARL REVNPGAMIV DVVRNPTGIA
ELLGARMYEL PERAQAVDAW LGDARHRARD QHAHGDGDHD HDHGGDEHHH DHEIRSHCVT
REQPLRLRSF QRFMALLAAE QGDDLLRVKG ILHLAERPGT PALVHGVQHV LHPVRWLPRW
PEDDRTSRLV FITRGIPRER LDLLLSALER ADVVAPAPAL SAEAPRSPDA
|
|---|
| |