Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hoch_0486 |
Symbol | |
ID | 8542866 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haliangium ochraceum DSM 14365 |
Kingdom | Bacteria |
Replicon accession | NC_013440 |
Strand | - |
Start bp | 660992 |
End bp | 661876 |
Gene Length | 885 bp |
Protein Length | 294 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 646385282 |
Product | undecaprenyl diphosphate synthase |
Protein accession | YP_003265019 |
Protein GI | 262193810 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0020] Undecaprenyl pyrophosphate synthase |
TIGRFAM ID | [TIGR00055] undecaprenyl diphosphate synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.327963 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.407745 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCTTTG AGGGAACGCC TCCTCCCGTC CGGCGACTGC CTCGCCATAT CGGGATCATC ATGGACGGCA ATGGCCGCTG GGCTCAACAG CGCGGTCTGC CGCGGCTAGA GGGGCATCGC GTCGGTGCCG ATAGCGTGCG CGACATCGTC CGCGCCGCCC GCCAACTCGA CGTCGAGGCG CTGACGCTGT ACGCGTTTTC GGCTCAGAAC TGGGCCCGTC CACCTGAGGA AGTTGCCGGG CTCATGGGCC TGCTGCGCGA CTACATCGTC GGCGAGCGGC AGGAGATCAT GGACAACGAC ATCCGCTTGC TGGCCATCGG CGACATCGAA CGGATGCCGA GCTTCGTCCG CGATCCGCTC GACGCGCTGG TCGCAGACTC GGCCAACAAC CGCTCCATGC GCCTGGTGCT GGCGCTGTCC TACGGCGGTC GCGAGTCGAT CGTACGCGCC GCCAAGCGCG CCATCGAAGC CGTGCGCGGC GGCCGCATGA ACCCCGATGA GCTCGACATC GACGGCTTCA GCAAGCTGCT GCCGACCGGC GAGCTGCCGC CGCTCGATCT GCTCATCCGC ACCAGCGGCG AGCAGCGCAT CTCCAATTTC CTGCTGTGGG AGCTGGCCTA CGCCGAGCTC ATCTTCACCG ATGTGCCGTG GCCCGACTTC CGCCGCCAAC AGCTCTACGA CGCGCTCGCC AGCTACGCGC ATCGCGAGCG CCGCTTCGGG CTCACCGGGG CTCAGATCTC GAACGCGGAC TCGGACCTAG GTCTCGAGCC GCCGAGCGCG CTCGCCGGAG CCCCGTCGGA AGCCGCCGCC TCGCCGGTGA GCCCGACCTC CGCCGAGGTA ACCGACCACC CCCCGCCAGC GGCCGACGCC ACCTCGCGCG ACTGA
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Protein sequence | MSFEGTPPPV RRLPRHIGII MDGNGRWAQQ RGLPRLEGHR VGADSVRDIV RAARQLDVEA LTLYAFSAQN WARPPEEVAG LMGLLRDYIV GERQEIMDND IRLLAIGDIE RMPSFVRDPL DALVADSANN RSMRLVLALS YGGRESIVRA AKRAIEAVRG GRMNPDELDI DGFSKLLPTG ELPPLDLLIR TSGEQRISNF LLWELAYAEL IFTDVPWPDF RRQQLYDALA SYAHRERRFG LTGAQISNAD SDLGLEPPSA LAGAPSEAAA SPVSPTSAEV TDHPPPAADA TSRD
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