Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hoch_0468 |
Symbol | |
ID | 8542848 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haliangium ochraceum DSM 14365 |
Kingdom | Bacteria |
Replicon accession | NC_013440 |
Strand | - |
Start bp | 644072 |
End bp | 644866 |
Gene Length | 795 bp |
Protein Length | 264 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 646385265 |
Product | hydrolase, TatD family |
Protein accession | YP_003265002 |
Protein GI | 262193793 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0084] Mg-dependent DNase |
TIGRFAM ID | [TIGR00010] hydrolase, TatD family |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.573991 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGTTCA TCGACTCTCA CGCCCACATC GACGCCGCCG ACTTCGACAG CGATCGCCCC GAAATGCTCG CCCGCGCTCA CAGCGCCGGC GTACGCGAGA TCGTGTGCGT CGGCGCCGCC GACGACCTCG AGACCGCCGA GCGCACCGTG GCCTTTGCCG AAACCCACGA GGGCTTCTAC GCCACGGTCG GCATCCACCC GCACAACGCC GACGCCATGC AGCCCGGCTG GTGGAGCGAA CTCGAGACCC TGGCCGCACG CGCGCCCGTG GTCGGCGTCG GCGAGACCGG GCTCGACTAC TTCTACGATA ACTCCCCGCG CGAGCAGCAG CGCGACTGCT TTGCCCGCTT CCTCGCGCTC GGACGCGCGC TCGGCCTGCC CGTGGTGTGC CACGTGCGCG ACGCCCACGA CGACGCCCGC GCCATCCTCC GCGAGGCCGA CGCCGGCAGC ATCGGCGCGG TCATCCACTG CTTCACCGGC ACCCCCGAGG ACGCCGCCGC GTACGTCGAT ATGGGCCTCT ACGTGTCGTT CTCGGGCATC GTCACATTTC CCGGCAAGCG CTCGGCCCCG GTGCGCGAGG CGGTTCGCAA GGTCCCGGCC GACCGCCTGC TCATCGAGAC CGACTGCCCC TACCTGGCCC CGGTGCCCGA GCGCGGCAAG CGCAACGAGC CGGCGTTTTT GGTCCACACG GCCGAAGTCG TCGCGCGCGA GGCCGGCATG AGCCTGGCCG AGCTGGCCGA CGCCACCGCG GCCAACACCC GCCGCTTCTT CGGCCTGCCC ACGCCGCCAG CATAG
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Protein sequence | MQFIDSHAHI DAADFDSDRP EMLARAHSAG VREIVCVGAA DDLETAERTV AFAETHEGFY ATVGIHPHNA DAMQPGWWSE LETLAARAPV VGVGETGLDY FYDNSPREQQ RDCFARFLAL GRALGLPVVC HVRDAHDDAR AILREADAGS IGAVIHCFTG TPEDAAAYVD MGLYVSFSGI VTFPGKRSAP VREAVRKVPA DRLLIETDCP YLAPVPERGK RNEPAFLVHT AEVVAREAGM SLAELADATA ANTRRFFGLP TPPA
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