Gene Hoch_0332 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_0332 
Symbol 
ID8542712 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp469311 
End bp469976 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content65% 
IMG OID646385129 
ProductYceI family protein 
Protein accessionYP_003264866 
Protein GI262193657 
COG category[S] Function unknown 
COG ID[COG2353] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.555193 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCGAA TTGCTCGCAT TCTAGTGACC GTGGGCGCGA CCGCCATGCT CTTCGCCGGC 
TGTAGCAAAG AGGAGCCCGT CGCCGAGGAG CCCGTCGCCG AGGAGCCCGC AGCCGAGGAG
CCCGCAGCCG AGGAGCCTGC CGCCGAAGAG CCCGCCGCAG CCGCCGCCGA GGAGGGCGCT
GACTTCGTCA AGCTCTACGC CAGCCACGAG CCGGCCACCG AGGCCGACCC GGTGATCATC
GAGATCCAGA CCTTCCAGGT CACCGAGGCC TCGTTCGACC CGGCCAACCT CGAGGGCGCC
ACCGCCGCGT TCGAGCTCGA TCTCACCTCG ATCAAGAGCG ACAAAGAGAA GCGCGACGCG
CACCTGCAGA CCCCCGACTA CCTCGACACC GGCAAGTACG GCATGGCCAC CGTCAAGGTC
CACGACGTCA AGAAGGTCGA CGACGACACC TTCAGCGCCC AGGCCGACGT GAACTTCCGC
GAGATGGACA AGACCTTCCC CATCGAGTTC GACGTGGTCG GCTCGACCGA GGACACCGTC
ACCATCAAGG GTATGCACGA GTTCGACCGC ATGGACTTCG GCGTCGGCAA GGAGCCCGAC
GGCGAGAACG AGAAGGTCGC CAAGAACGTC AAGATCGAGA TGCAGCTCAC CCTGAAGAAG
TCGTGA
 
Protein sequence
MKRIARILVT VGATAMLFAG CSKEEPVAEE PVAEEPAAEE PAAEEPAAEE PAAAAAEEGA 
DFVKLYASHE PATEADPVII EIQTFQVTEA SFDPANLEGA TAAFELDLTS IKSDKEKRDA
HLQTPDYLDT GKYGMATVKV HDVKKVDDDT FSAQADVNFR EMDKTFPIEF DVVGSTEDTV
TIKGMHEFDR MDFGVGKEPD GENEKVAKNV KIEMQLTLKK S