Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hoch_0298 |
Symbol | |
ID | 8542677 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haliangium ochraceum DSM 14365 |
Kingdom | Bacteria |
Replicon accession | NC_013440 |
Strand | + |
Start bp | 433581 |
End bp | 434684 |
Gene Length | 1104 bp |
Protein Length | 367 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 646385094 |
Product | ABC transporter related protein |
Protein accession | YP_003264832 |
Protein GI | 262193623 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.717985 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTGCTG TCATCGAAGT CAACGACCTG CGCAAGCGCT TCCGCACGCC GCTGCGCCGC AATGAAGTCG AGATCCTGCG CGGGCTCAGC TTCTCCGTCG AGCAGGGCGA GGTGTACGGT TTCCTCGGCC CCAACGGCGC CGGCAAGACC ACCACCATCC GCATCCTGAT GGGCCTGGTC GCGGCCTCGG GCGGCAGCGC CAAGCTGCTC GGTGAGCCGG TACCCAGCCG CGAGGCCCGC GCCAAGCTGG GCTTTCTGCC CGAGTCGCCG TATTTCTACG ACTACCTCAC CGTCGCCGAG CTGCTCGACC TCACCGGCCG GCTGTTCGGC ATCGAGCACC GCGCCCGCAA GCGCCGGGCC GAGGCCCTGA TCGAGCGCGT CGGGCTCACG CGGGCGCGCA AGACGCCGCT CAAAAAGTAC TCCAAGGGCA TGTTGCAGCG CGCCGGCCTG GCCCAGGCGC TGATCAACGA CCCCGCCTTG GTGGTGCTCG ACGAGCCCAC CAGCGGCCTC GATCCAGTCG GTCGCAAAGA CGTGCGCGAC ATCATCCTGT CGCTGCGCGA GCAGGGCAAG ACCGTGTTCT TCTCGTCGCA CATCCTGGCC GACGTCGAGA CCGTGAGCGA TCGCATCGGC ATCGTGGTCG GCGGGCTCAT GCGCGACACC GGCAGCGTGC GCGCCCTGTG CGGCGACGCC CTGCTCCGCA CCGAGGTGGT CGTGCGCGTG CCCGCGGCGC TGTCGGACGC GGACCAGGCC GCGCTGGTGG GCGACGCCGG GTCGGTCGAG CGTCGCCCGG TGCTGGGCGC CGACGGGCCC AGCGAGGCGC TGCACGAGCT GCACCTGTCG CTCGCGCCCG ACGCCGATGT CGACGCCTTT TTGGCCCATG CGCGCCAACA TGGCGCTCGC GTCGAGTCCG TGAGCCCGCG CCGGCGCACG CTCGAGGACC TGTTTCTGCA CCACGCCGGG GTCAAGGCCG GCGCAGGCGC CGGACCTGGC GCCGGGCCAG CAGGCGAGCC CGTCGCCGAG TCGCAACCGT CGGACGACGG TACGAAAAAC ACCGCCGAGG ACGAAGGCAA GGGCAAGGAC AAGGACAAGG AGGCCGAGGC ATGA
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Protein sequence | MSAVIEVNDL RKRFRTPLRR NEVEILRGLS FSVEQGEVYG FLGPNGAGKT TTIRILMGLV AASGGSAKLL GEPVPSREAR AKLGFLPESP YFYDYLTVAE LLDLTGRLFG IEHRARKRRA EALIERVGLT RARKTPLKKY SKGMLQRAGL AQALINDPAL VVLDEPTSGL DPVGRKDVRD IILSLREQGK TVFFSSHILA DVETVSDRIG IVVGGLMRDT GSVRALCGDA LLRTEVVVRV PAALSDADQA ALVGDAGSVE RRPVLGADGP SEALHELHLS LAPDADVDAF LAHARQHGAR VESVSPRRRT LEDLFLHHAG VKAGAGAGPG AGPAGEPVAE SQPSDDGTKN TAEDEGKGKD KDKEAEA
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