Gene Hneap_1998 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHneap_1998 
Symbol 
ID8535157 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothiobacillus neapolitanus c2 
KingdomBacteria 
Replicon accessionNC_013422 
Strand
Start bp2141741 
End bp2143078 
Gene Length1338 bp 
Protein Length445 aa 
Translation table11 
GC content54% 
IMG OID646384380 
Productprotein of unknown function DUF945 
Protein accessionYP_003263867 
Protein GI261856584 
COG category[S] Function unknown 
COG ID[COG5339] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAAAC TGGCGATAGG ACTGGGTGTG GTAATTGTCG CCGGCATCGC GGCCGCACCG 
TACGTTTCCG GCATGATGAT CGAAAAACGT ATGCAATCGG TCAGTGCGCT TCCGGGGCTC
TCTGATGGCA TCACCTGGTC GCTTGACTCA TATCAGCGAG GCTATTTGAG TTCGACAGCA
ACCTCTCATG TCACACTGGC TGGCGCAGAT GGCACACGCT ATCTCATTCA TTTCAAGCAC
ACCATCAATC AGATTCCCGG GGTGGATGGT CGGTATGCCA CGATCCAAAC CGTTTGGGTG
CCGGATACGG AAATCAAGCC TCAGGTTGAG CAACTCTTTT CAGGGAAAGA GCCGGTCGTG
CTGAACACGG CGCTGAGCGT GTTCGGTGGT GCGCACACCG AGGGTGAATT TGCGCCCATC
AACCAACCTC AAGTCACCTT TAGTGGCGGC ACGATGACAA TCGATGCCGC GGCCAGCGGC
AAGTTCGCCT ATACCGGCGC GTTTGATTCG CTGAATATCA CCGGTCAGAA AGACGATAAG
GGCATGCCTC AATCGGCTGC CTTCAAGGGT ATTACTCTTG ATGCCGATGG GGTGATGGAC
AAGAAAAGCC ACATTGCCTG GAACAGCCAG TTTGCAATGA AAGTTGCTTC GTTGACGGTG
GGCAACGAGG GCGCTCTTTC CGGATTGGCT CTGACGAGTC ACTCTTTGCG GACCGGCGAT
GATTTCGCCG TTGATGTCGG CTTGGATGTG GCTAATGCTG ATTTTTCTGC CGCGCCGCCT
GCCTTCCGCA CGATGAAGGA TCTGAAATTC AAATACGGCA TTTCGCGGGT CGACGCCCCC
GCGCTTGAAG ACATTGTTAA GCAGGCACAG CTTGCGCAAA AGCAGACCAT GGGTGATCCG
GACAAAATCA AACAGGCGGT ATCCATGAGC GTGATGACGC ATCTGCCCGC CTTGCTGAAT
GCGGGGCCGA AATTTGAGAT TGATCCGATC AGCTTCAAAT TGCCGGATGG TACCGTGGCG
CTGCATTTCT CCGCGGAGTT GCCACCGGGG CATGGCAAGG AAGGGATGAA TAATCCGATG
TCGCTGCTTA ATCTTCTCGA CATGAAAGGG GATTTCAGCG TTCCCGAAGC GGTTTATCAG
GCGGCTCAGA CTGAAGCCGG GCCAGATCGC CAAGCGGTGA ATGAGCAGCA ACTGCAGCAA
ATGGTGCAAA AAGGGTACAT CACGCAGTCC AATGGCATGT TGTCGACCAA TTTTGCCTTC
AAGGCCGGAC AGCTCACCAT CAACGGCTTG CCAGCCAATG ATTTGCTGGG CGTGATGTCA
GCCATGTCTG CACGGTAA
 
Protein sequence
MNKLAIGLGV VIVAGIAAAP YVSGMMIEKR MQSVSALPGL SDGITWSLDS YQRGYLSSTA 
TSHVTLAGAD GTRYLIHFKH TINQIPGVDG RYATIQTVWV PDTEIKPQVE QLFSGKEPVV
LNTALSVFGG AHTEGEFAPI NQPQVTFSGG TMTIDAAASG KFAYTGAFDS LNITGQKDDK
GMPQSAAFKG ITLDADGVMD KKSHIAWNSQ FAMKVASLTV GNEGALSGLA LTSHSLRTGD
DFAVDVGLDV ANADFSAAPP AFRTMKDLKF KYGISRVDAP ALEDIVKQAQ LAQKQTMGDP
DKIKQAVSMS VMTHLPALLN AGPKFEIDPI SFKLPDGTVA LHFSAELPPG HGKEGMNNPM
SLLNLLDMKG DFSVPEAVYQ AAQTEAGPDR QAVNEQQLQQ MVQKGYITQS NGMLSTNFAF
KAGQLTINGL PANDLLGVMS AMSAR