Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hneap_1870 |
Symbol | |
ID | 8535028 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halothiobacillus neapolitanus c2 |
Kingdom | Bacteria |
Replicon accession | NC_013422 |
Strand | - |
Start bp | 2005628 |
End bp | 2006155 |
Gene Length | 528 bp |
Protein Length | 175 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 646384251 |
Product | ATP-cone domain protein |
Protein accession | YP_003263739 |
Protein GI | 261856456 |
COG category | [K] Transcription |
COG ID | [COG1327] Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains |
TIGRFAM ID | [TIGR00244] transcriptional regulator NrdR |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0173764 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCAGTGCA TTGCGTGCGG GCATCCCAAT ACTCATGTGA TTGATTCGCG TATGGTCGAG GGCGGTGTTT CTATTCGCCG CCGTCGAGAG TGTCTTGCCT GCAAGCAGCG CTTTACCACC TACGAAACCG CCGATATACG CTTGCCGCGC ATCGTGAAAA GCAACGGTGC CCGGCAATCG TTCAACGAAG AAAAGCTTCG TTCGGGCATG ATGCGCGCGC TCGAGAAGCG GCCGGTTGCC ACCAGCCGGA TCGATGATGA AATCGATCAG ATCAAGAAAA GCCTGCAAGC CACAGGCGCC AAGGAAGTAA CAGCGCGAAA AATTGGTGAT TTGGTCATGC AGGCATTGCG CCGACTCGAT CAGGTGGCCT ATATCCGCTT CGCGTCGGTA TACCTGAGTT TCGACAACGT GGAGGCCTTC CGCGCGGCGA TCGAGGGCCT TAATCAGGAT TCTCTCGGCC AAGAAAGTCC GAGTGCCAAA TCAGAAAAAA TGGATGACGC GACCAAGGTT GATCCCGATG TCGGCTGA
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Protein sequence | MQCIACGHPN THVIDSRMVE GGVSIRRRRE CLACKQRFTT YETADIRLPR IVKSNGARQS FNEEKLRSGM MRALEKRPVA TSRIDDEIDQ IKKSLQATGA KEVTARKIGD LVMQALRRLD QVAYIRFASV YLSFDNVEAF RAAIEGLNQD SLGQESPSAK SEKMDDATKV DPDVG
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