Gene Hneap_1772 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHneap_1772 
Symbol 
ID8534930 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothiobacillus neapolitanus c2 
KingdomBacteria 
Replicon accessionNC_013422 
Strand
Start bp1907207 
End bp1907950 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content58% 
IMG OID646384154 
Productflagellar basal-body rod protein FlgF 
Protein accessionYP_003263642 
Protein GI261856359 
COG category[N] Cell motility 
COG ID[COG4787] Flagellar basal body rod protein 
TIGRFAM ID[TIGR02490] flagellar basal-body rod protein FlgF
[TIGR03506] fagellar hook-basal body proteins 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATCGTC TCGCCTACAT TGCCATGAGT GGCGCCAAGC AAACGCTGCT GGCCCAATCG 
ACCAATGCCA ACAATCTGGC CAACGTGAGC ACCCAGGGGT TTAAGGCCGA TCTGGATGCT
TTTCAATCCA TGCCGGTTTA TGGCCCCGGT TATGCAAGCC GGGTGTATGC CCAGGATGAG
CGCAGCGGCA CCGATTTTGC CCAGGGCCCA CTGATGACAA CGGGGCGTAG CTTGGATGTT
GCGCTCAAGG GGCAGGGGTT CATGGCTGTT CAGGCGCCCG ATGGTTCGAC GGCTTATACC
CGCCGCGGCG ATCTGCATAT CTCACCGAAT GGACAACTGC AAACCGGTAC CGGCGCTCCC
GTGCTGGGCA ACCAAGGGCC GATTGCCATT CCGCCGGCAA GCAAGATCGA TATTCTGGGC
GATGGCACGA TCTCGATCAT CCCGCTTGGC GGCGATGTCA ATGCACCGGC GCAGATCGAT
CGGATTCGTC TGGTCAATCC GCCATTGGCC GATCTGCAAA AACGCGGGGA TGGTTTGTTC
GCGCTCAAAC CGAACACGCC TGTCCCACAA CCGGACGCAG CCGTGCAGGT TGCCAGCGGC
GTGTTGGAAG GCAGCAATGT GAATCCGGTC GACTCGATGG TGAAGATGAT CGAGTACGGC
CGCCTGTTCG AAATGCAGAC CAAGATGATC AAAACGGCCG ATGCCAATAG TTCGGCGGCC
GATCAATTAT TGAAATTCAG TTGA
 
Protein sequence
MDRLAYIAMS GAKQTLLAQS TNANNLANVS TQGFKADLDA FQSMPVYGPG YASRVYAQDE 
RSGTDFAQGP LMTTGRSLDV ALKGQGFMAV QAPDGSTAYT RRGDLHISPN GQLQTGTGAP
VLGNQGPIAI PPASKIDILG DGTISIIPLG GDVNAPAQID RIRLVNPPLA DLQKRGDGLF
ALKPNTPVPQ PDAAVQVASG VLEGSNVNPV DSMVKMIEYG RLFEMQTKMI KTADANSSAA
DQLLKFS