| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_1750 |
|---|
| Symbol | |
|---|
| ID | 8534908 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halothiobacillus neapolitanus c2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013422 |
|---|
| Strand | - |
|---|
| Start bp | 1877815 |
|---|
| End bp | 1880892 |
|---|
| Gene Length | 3078 bp |
|---|
| Protein Length | 1025 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 646384132 |
|---|
| Product | protein of unknown function DUF490 |
|---|
| Protein accession | YP_003263620 |
|---|
| Protein GI | 261856337 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2911] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCATTGG AAAAATTGCA CATCGATACC CTCGATGGAT CGCTCTGTGG GCGGGGCAGC
GTGGATTTTG CCCCCCAGCT CACAGCCACT ATTCACGGGC AGGCAAGGGG TTTGAATCCG
GCAAGGCTTG CGCCCGCGGC GGCGGGGCAG GTGGGCTTTG ATTACCAGTT TTCATTTGCC
CAAAAAGACG ACAAGGCAAG TAAGCCCACA ACGCCTGAGA TGCAATTTAA GCTCACTGAG
CTTGGAGGGC ATCTAGCCAA GCTGCCCTTC GATGGGCTAA CGGTGGATGG TTCGATGGCG
AATCAACAGG TCTCGCTGGA TATCAGCAAC GGGACATTGG CGGGCGGTGC GCTCAAGGCA
AAGGGCGAAC TGGGCTTGAC CGGCGCACGG CCCGTGGCGC TCTCGCTGGA TTTGGATCGA
GGAGCCCTGC GCGATATGTT GGCATCAACT GGCGTGGTCG CCGAGGGAGC GATCAGCACG
CATCTTAAAG TGAACGGTTC ATTGGGTATC GATCCGTTGC GGGATGCTCA AATAAGTTTT
GACTGGTCAA TACCGAGCAC GGTGCTGCTT ATGCCTGCAA CTGCGGCTAA TCAAAAAACG
GTTCGGGTGC CGTTGTCATT GGCGTTACAC GGCAGTTTTG CCGATCAGCG GCTTGATGTG
AAGCAGGCAA AAATCAATCT GGCCGATGCG TCCATAAATG CCAAAGGCCG CGTGACGATG
GCGGATTTGG CGAAAAATAC GCCCGTCGAT TTGACCGTGA ATGCCCACAT CCCGCAACTC
GCGCAGATTC CCTGGCAGGC ATTCAATCTG CCCGATTTAA CCGGCAGTAT TGAGCTTAAA
ACCGAGGTAA CGGGCAGCGT GCAGCAACCG AACGCCACCG TTGATTTGCG CGCCCGTAAG
CTAGCCTACG CGCAATGGCA GTTGGCTAAC TTGAGCCTGA ACGGGCGGGT GAAACAGCAG
CAGACATCTG TCTACGATCT TTCCCTGCGT GCCGATCAGC TGACGCAAGA GAATGCCAAA
AAAACCGCTG ATGTGCGTTT GAATAAGCTC ACTTTGGATG CACAAGGCCA GTGGCCGCAA
TTTGTGTTCA ATGCGCAAAG CGCCGATGTT GGAGGCGGCT TCAGTGCAGC GCAGCGTTTT
AGGCTGACTG CGCAGAGCCC GCAGGGGGAA GTGCGCCTGG CGATTGATGG TTTACTGGCT
CAAATTGGGA GTACACCCAT ATTGAGTTGG AGCGGGCAAA TCAAACACCT GGACGTACTG
CCCGCGCGCT TTGAAGGTAA ATCGATACCG TCATGGCATC TTGAAAAACC CGCAGATCTG
ACCTTATCAA AGCAGCAACA AACCTTGGGT AAAACGTGTC TGGCCACGGA TGCGAGTAAA
AAATACCAGT CGGGTCATCT GTGCATTGAC CTAGCCAGAA ACTTGGCGAG TCAGGAAAAA
AGCAAGGGTC AGATGGATGC CGATTTGCCC TTGGCGCTGA TCACGCCCTG GCTGCCGATT
GCCGCTGATT TGCCCGGACG CGTGCGCGTA ACAGCCAATG GGTCGATCAC GGCGGGGCAA
CTGGGCGGCT CGCTGAAATT GAGCTTGCCC GACAGCGAAT TTCGTCTGCC TGACACTTTG
GATAATCAAG CCTACCACTA CAAGAACGTG GATCTGACCG CCCGTGTTCA ATCGGGTGTC
GTGAATGTAG CAGTTGCCGC TGATGTACCG CAATTGCTCA ACATCAAAGG CGGTGGCACC
GTGGGGCTAG CCGGGGCAAA ACCCCTGGCG CTCGATCTTA CGGCAGCGTT GCCCAGCGTG
CGCGTTTTAC AAGGCTTCTT GCCGCAAGTT GCTGGGCTTA AGGGACAGGC GCGTGCCGAT
CTCAAGGTTG CCGGTACGCT GGATCAACCC AAGCCCAGTG GAAAGCTCAC GGTCGATCAA
TTGGCGTTCA CCCTGCCCGA TACCGGAGTG GCTTACGATC AAGGCACGCT CAATGCGCAG
ATCGACAGCA ACGGACAACT TGTTTTTTCC GGTGGTTTGA ACGGTTTGGT GGCCCAAGAC
AGTGCCAATA CAATACCGGC AAACAAGCAG CCATCGGCGG TCGCAAAGGG CCATCTGCGT
ATTCAAGGGA CTGGCGATTT GGCCAAGCTG CCTCAATGGG AGGTGCAGGC GCAGATTCAA
GGGCAAGACG TTCCGGTATT GCGTCTGCCA AGCCTTCTGA TCGATGCCAG TCCTGATTTG
ACGCTGGATG CCAGCAAGGC GGGCGCAAAA ATCGGCGGTT CGATCACACT GCCCACGGTG
ACCGCGCGCA TTGAAAAACT CCCCGACGCG GTGGTCAAAT CAACCAATGA TTTGGTGATT
GTGGGTGAGA AAAAACTTAC CCCCACAACG GCTTATCCCG TAACAGCGGA TATCAAACTG
ATTCTGGGCC AAGCAGTTTC GCTCGCCGGC ATGGGTTTTT CGACCGGTTT GACCGGTACG
CTTAACCTGC GCCTGCGTCC GAACGCGCCC TTGGCTGCAT TCGGCGAAAT TGATTTAATC
AACGGCACGT ACAAAGCCTA TGGGCAAAAT CTGGCCGTCA AACAGGGGCG GTTACAGTTT
GTCGGGCCGT TGGGCGATCC GGGTATTGCG GCCACTGCGC AACGGGTCGT TGGTGACACC
ACGGTCGGGC TGAACATCAC TGGCACGCTG TATCAACCCA AAACAACCGT GTTTTCATCG
CCCTCCTTGC CCGAATCCGA TGCCCTGTCG ATACTGCTGA CTGGTAAGCC CTTGAGCGAT
TCGGGATCGG GGGATCGGGC CATGCTGATG AATGCTATTG CCGGTCTCGG TGTGGCGCAG
GGCAACGATA TCGTGCGCGA CATCGGCCAG AAGTTCGGCT TTGATTCGGT TGGTTTGGAC
ACCTCCGGGG GATTTGGCGA TACGCAGCTT TCCCTAGGTA AACAAATCGG TGACCGTCTC
TTCGTGCGGT ACGCGGTGGG TGTGGTCAAT GGCTTGAGTG AACTCATCAC GCAATACAAA
TTAAGCAATC TGTTTTCAAT CGAAATCACC ACGAGTCCAG ACGCGACCGG CGGTGATCTG
ATCTACCGGA TTCACTGA
|
|---|
| Protein sequence | MSLEKLHIDT LDGSLCGRGS VDFAPQLTAT IHGQARGLNP ARLAPAAAGQ VGFDYQFSFA
QKDDKASKPT TPEMQFKLTE LGGHLAKLPF DGLTVDGSMA NQQVSLDISN GTLAGGALKA
KGELGLTGAR PVALSLDLDR GALRDMLAST GVVAEGAIST HLKVNGSLGI DPLRDAQISF
DWSIPSTVLL MPATAANQKT VRVPLSLALH GSFADQRLDV KQAKINLADA SINAKGRVTM
ADLAKNTPVD LTVNAHIPQL AQIPWQAFNL PDLTGSIELK TEVTGSVQQP NATVDLRARK
LAYAQWQLAN LSLNGRVKQQ QTSVYDLSLR ADQLTQENAK KTADVRLNKL TLDAQGQWPQ
FVFNAQSADV GGGFSAAQRF RLTAQSPQGE VRLAIDGLLA QIGSTPILSW SGQIKHLDVL
PARFEGKSIP SWHLEKPADL TLSKQQQTLG KTCLATDASK KYQSGHLCID LARNLASQEK
SKGQMDADLP LALITPWLPI AADLPGRVRV TANGSITAGQ LGGSLKLSLP DSEFRLPDTL
DNQAYHYKNV DLTARVQSGV VNVAVAADVP QLLNIKGGGT VGLAGAKPLA LDLTAALPSV
RVLQGFLPQV AGLKGQARAD LKVAGTLDQP KPSGKLTVDQ LAFTLPDTGV AYDQGTLNAQ
IDSNGQLVFS GGLNGLVAQD SANTIPANKQ PSAVAKGHLR IQGTGDLAKL PQWEVQAQIQ
GQDVPVLRLP SLLIDASPDL TLDASKAGAK IGGSITLPTV TARIEKLPDA VVKSTNDLVI
VGEKKLTPTT AYPVTADIKL ILGQAVSLAG MGFSTGLTGT LNLRLRPNAP LAAFGEIDLI
NGTYKAYGQN LAVKQGRLQF VGPLGDPGIA ATAQRVVGDT TVGLNITGTL YQPKTTVFSS
PSLPESDALS ILLTGKPLSD SGSGDRAMLM NAIAGLGVAQ GNDIVRDIGQ KFGFDSVGLD
TSGGFGDTQL SLGKQIGDRL FVRYAVGVVN GLSELITQYK LSNLFSIEIT TSPDATGGDL
IYRIH
|
|---|
| |