Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hneap_1683 |
Symbol | |
ID | 8534841 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halothiobacillus neapolitanus c2 |
Kingdom | Bacteria |
Replicon accession | NC_013422 |
Strand | - |
Start bp | 1809202 |
End bp | 1810020 |
Gene Length | 819 bp |
Protein Length | 272 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 646384067 |
Product | TatD-related deoxyribonuclease |
Protein accession | YP_003263555 |
Protein GI | 261856272 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0084] Mg-dependent DNase |
TIGRFAM ID | [TIGR00010] hydrolase, TatD family |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTCGATA CACATTGTCA CCTTGACGAT CTGGTTGCGC GTCTGCCATT GCCCGACGTG GTGGCACGAA TGCGGCAGGC AGGTGTCGAT GGCGTGATAT CCGTGGGTGT CGCTCCTGAT CAATGGAAAG AGCAAAGCGA AGTAGCGCAG AAGGCCGAGA ACCTTGGGGT GCCGGTTGGT CTGGCGTATG GCGTGCATCC TTGGTGGGCT GATCGGGTCG AATCGAGCAC CGCGTTGAAG GCTTTAGCGA GCTGGATTGA ACAGGAAGGC GACCGGGTGC TGGCCATCGG CGAGATCGGG TTGGATTTTG CGCCCAAGAT GCCCGATGCG ACGCGCCAAC ATGAGTTGTT TATCGGGCAG ATCAACATTG CTTTGCAGCA GCAATTGCCC GTGATTTTGC ACGAGCGCAA ATCAGCCGAT CAATTGCTGG CGGTCATTCG CCGCCATCCC GCGCTTCGAG GAGTCGTGCA CGGCTTTACC GGCTCATTAC AGCAGGCCCA TCAGTTGATT GAACAGGGGT TCTATCTCGG GGTCGGCACG GCCATCACCC ATCCGCGCGC CACGCGTGTG CGGGCCATGT TAAGCGCACT GCCCGTCGAG GCATTGTTGC TCGAATCAGA TGCGCCAAAC CAGCCCGGAC ATACGCATCA AGGCGAACTG AATGAACCCG CCTTTATCGT CGAACAGCTC GATGTGCTCG CAGAACTGTT CGCAATGGAC GTACCTACGC TCGCAGAACA ATTGGATGCC AATGCGAAGA CTGTGTTTGG CAACCGTCTG TTATCGGGTA CGTTGAGTCC CCCTCAACCA CGCGATTAA
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Protein sequence | MFDTHCHLDD LVARLPLPDV VARMRQAGVD GVISVGVAPD QWKEQSEVAQ KAENLGVPVG LAYGVHPWWA DRVESSTALK ALASWIEQEG DRVLAIGEIG LDFAPKMPDA TRQHELFIGQ INIALQQQLP VILHERKSAD QLLAVIRRHP ALRGVVHGFT GSLQQAHQLI EQGFYLGVGT AITHPRATRV RAMLSALPVE ALLLESDAPN QPGHTHQGEL NEPAFIVEQL DVLAELFAMD VPTLAEQLDA NAKTVFGNRL LSGTLSPPQP RD
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