Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hneap_1622 |
Symbol | |
ID | 8534780 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halothiobacillus neapolitanus c2 |
Kingdom | Bacteria |
Replicon accession | NC_013422 |
Strand | - |
Start bp | 1760053 |
End bp | 1761093 |
Gene Length | 1041 bp |
Protein Length | 346 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 646384009 |
Product | P-type conjugative transfer ATPase TrbB |
Protein accession | YP_003263497 |
Protein GI | 261856214 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG4962] Flp pilus assembly protein, ATPase CpaF |
TIGRFAM ID | [TIGR02782] P-type conjugative transfer ATPase TrbB |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTTGATG AAGTCACCCA ACGCCGATTA CTGGAAAAAC TCGAACGCGA AGGCGGCGAG GTATTTATCT CGGCACTCAG AAACCCCGAT GTCATTGAAG TCATGCGCAA TTCTGATGGC CGCCTTTGGG CGGATTTTTC AGGCGTGGGC ATGAAGTGTT TGGGGGAAAT GGCCGCCTCA CGCGCCGAAT CGATTTTATC CACCTGCGCC TCGATGCTCG GTACCGCCTT GACTCGCGAA TCCCCCATTC TGGAAGGTGA ATTTCCGCTG GACGGCTCAC GGCTTCAGGG GTTAGTTCCG CCCTTGTCTT CAACCGCCGT ATTCGCAATC CGCAAAAAAG CACTCAAGGT GTTTACCCTG GCCGACTACA TCGAACGCGG AATACTTGCG GAACACTCAG CAGAACCCCA TGATTTTCTT TCCCCAATCG TCTCTTCTAT GCAAAGCCAC GCCGCAGATT GGTTGAATCT GGCGCTATCA ACACGCCTGG AATCTGCAAT TAGAGAAAAG ATGAATATCT TGGTTGTCGG CGGTACCGGA TCAGGCAAAA CCACGCTGGC CAACGCGTTG CTGCATTCGT TATCAGAGCA ATGTCCTCAT GACCGAATTG TTGCGATTGA AGACACGATG GAGTTACAGG TGCGCGTGGA AAACGCCGTG CTGCTCCGTG CATCCGAACA AGTGCCTATG TCGCGTTTGC TTCGCGCGAC GATGCGCTTG CGACCCGACC GAATCATTGT GGGCGAAGTG CGTGGCGGTG AAGCCTATAC CCTGCTCAAA TCTTGGAATA GCGGTCATCC CGGCGGACTG GCTACCATTC ACGCCAATAG TGCGGAGGAA GGTCTGGATA AACTCAGCCA GTACATCTTC GAGGCGCCAG ATGCGCGGAA TTTCTCGCAT GACATGGTGG GCAGAATGAT CGCCAGCACG GTTAATGTGG TGGTTTTCAT CGAGCGAACT TCAATGGCAC CAGGGCGGCA GGTGAAGCAG GTCGTGCGCG TGCGCGGCTT CAAGGATGGG CGGTTTGTAT TTGAGGGGTG A
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Protein sequence | MLDEVTQRRL LEKLEREGGE VFISALRNPD VIEVMRNSDG RLWADFSGVG MKCLGEMAAS RAESILSTCA SMLGTALTRE SPILEGEFPL DGSRLQGLVP PLSSTAVFAI RKKALKVFTL ADYIERGILA EHSAEPHDFL SPIVSSMQSH AADWLNLALS TRLESAIREK MNILVVGGTG SGKTTLANAL LHSLSEQCPH DRIVAIEDTM ELQVRVENAV LLRASEQVPM SRLLRATMRL RPDRIIVGEV RGGEAYTLLK SWNSGHPGGL ATIHANSAEE GLDKLSQYIF EAPDARNFSH DMVGRMIAST VNVVVFIERT SMAPGRQVKQ VVRVRGFKDG RFVFEG
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